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  5. Cre09.g392350

Cre09.g392350 (GRP2, ATGRP2, GR-RBP2)


Aliases : GRP2, ATGRP2, GR-RBP2

Description : Glycine-rich RNA-binding protein 2, mitochondrial OS=Arabidopsis thaliana


Gene families : OG0000073 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000073_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre09.g392350

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00251200 evm_27.TU.AmTr_v1... Glycine-rich RNA-binding protein RZ1C OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AMTR_s00012p00103290 evm_27.TU.AmTr_v1... Organelle RRM domain-containing protein 2, mitochondrial... 0.01 OrthoFinder output from all 47 species
AMTR_s00013p00256900 GRP2, ATGRP2,... RNA processing.organelle machineries.RNA... 0.02 OrthoFinder output from all 47 species
AT1G18630 GR-RBP6 glycine-rich RNA-binding protein 6 0.03 OrthoFinder output from all 47 species
AT3G23830 GR-RBP4, GRP4 glycine-rich RNA-binding protein 4 0.01 OrthoFinder output from all 47 species
AT3G26420 ATRZ-1A RNA-binding (RRM/RBD/RNP motifs) family protein with... 0.05 OrthoFinder output from all 47 species
AT5G04280 No alias RNA-binding (RRM/RBD/RNP motifs) family protein with... 0.05 OrthoFinder output from all 47 species
Adi_g013366 ATRBP31, CP31,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g016848 CCR2, ATGRP7,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g043489 GRP2, ATGRP2, GR-RBP2 RNA editing factor *(ORRM3) & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g056634 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g085301 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g106770 CCR2, ATGRP7,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g108265 No alias RNA chaperone *(RZ1) & original description: none 0.01 OrthoFinder output from all 47 species
Aev_g09046 No alias RNA chaperone *(RZ1) & original description: none 0.01 OrthoFinder output from all 47 species
Ala_g05447 No alias RNA chaperone *(RZ1) & original description: none 0.01 OrthoFinder output from all 47 species
Ala_g22980 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g27510 CCR2, ATGRP7,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g32091 CCR2, ATGRP7,... not classified & original description: none 0.01 OrthoFinder output from all 47 species
Als_g44798 GR-RBP3 RNA editing factor *(ORRM3) & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene15568.t1 ATRZ-1A, Aspi01Gene15568 RNA chaperone *(RZ1) & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene16813.t1 GRP2, ATGRP2,... RNA editing factor *(ORRM3) & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene16822.t1 GRP2, ATGRP2,... RNA editing factor *(ORRM3) & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene25249.t1 CCR2, ATGRP7,... not classified & original description: none 0.01 OrthoFinder output from all 47 species
Azfi_s0328.g065292 GR-RBP4, GRP4 RNA editing factor *(ORRM3) & original description: CDS=40-945 0.01 OrthoFinder output from all 47 species
Cba_g38953 CCR2, ATGRP7,... not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ceric.09G066000.1 Ceric.09G066000 RNA chaperone *(RZ1) & original description:... 0.01 OrthoFinder output from all 47 species
Dac_g03569 CCR2, ATGRP7,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g10484 GR-RBP4, GRP4 RNA editing factor *(ORRM3) & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g12373 No alias RNA chaperone *(RZ1) & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g45667 GRP2, ATGRP2, GR-RBP2 RNA editing factor *(ORRM3) & original description: none 0.07 OrthoFinder output from all 47 species
Dcu_g48605 No alias RNA chaperone *(RZ1) & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g21776 GRP2, ATGRP2, GR-RBP2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g04232 GRP2, ATGRP2, GR-RBP2 RNA editing factor *(ORRM3) & original description: none 0.01 OrthoFinder output from all 47 species
Ehy_g10661 GRP2, ATGRP2, GR-RBP2 RNA editing factor *(ORRM3) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g14326 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
GSVIVT01016195001 No alias Glycine-rich RNA-binding protein RZ1B OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
GSVIVT01033666001 No alias Glycine-rich RNA-binding protein RZ1B OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Gb_37522 No alias Organelle RRM domain-containing protein 1, chloroplastic... 0.01 OrthoFinder output from all 47 species
Len_g02563 GRP2, ATGRP2, GR-RBP2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g30812 GR-RBP4, GRP4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g05878 GRP2, ATGRP2, GR-RBP2 RNA editing factor *(ORRM3) & original description: none 0.02 OrthoFinder output from all 47 species
MA_10428777g0010 CCR2, ATGRP7,... Glycine-rich RNA-binding protein GRP1A OS=Sinapis alba... 0.05 OrthoFinder output from all 47 species
MA_10436424g0010 ATRZ-1A RNA chaperone (RZ1|GR-RBP) 0.02 OrthoFinder output from all 47 species
Msp_g06624 GR-RBP3 not classified & original description: none 0.1 OrthoFinder output from all 47 species
Msp_g31887 GR-RBP4, GRP4 RNA editing factor *(ORRM3) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g04562 CCR2, ATGRP7,... not classified & original description: none 0.01 OrthoFinder output from all 47 species
Pp3c4_6610V3.1 GRP2, ATGRP2,... glycine-rich RNA-binding protein 3 0.01 OrthoFinder output from all 47 species
Ppi_g21521 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000635 GR-RBP3 RNA editing factor *(ORRM3) & original description: CDS=202-855 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0065.g016008 No alias RNA chaperone *(RZ1) & original description: CDS=133-945 0.03 OrthoFinder output from all 47 species
Sam_g26697 No alias RNA chaperone *(RZ1) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g35314 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc02g088790.3.1 GR-RBP3, Solyc02g088790 RNA editing factor (ORRM) 0.04 OrthoFinder output from all 47 species
Solyc10g051377.1.1 CCR2, ATGRP7,... RNA chaperone (RZ1|GR-RBP) 0.04 OrthoFinder output from all 47 species
Spa_g30378 GR-RBP4, GRP4 RNA editing factor *(ORRM3) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g06526 No alias RNA chaperone *(RZ1) & original description: none 0.01 OrthoFinder output from all 47 species
Tin_g38016 No alias RNA ediTing factor *(ORRM3) & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e005260_P002 Zm00001e005260 RNA chaperone (RZ1|GR-RBP) 0.04 OrthoFinder output from all 47 species
Zm00001e012278_P001 Zm00001e012278 RNA chaperone (RZ1|GR-RBP) 0.04 OrthoFinder output from all 47 species
Zm00001e033010_P001 Zm00001e033010 RNA chaperone (RZ1|GR-RBP) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
MF GO:2001070 starch binding IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 5 74
No external refs found!