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  5. Cre10.g423650

Cre10.g423650 (PRPL11)


Aliases : PRPL11

Description : Protein biosynthesis.organelle translation machineries.plastidial ribosome.large subunit proteome.psRPL11 component


Gene families : OG0007074 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007074_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre10.g423650
Cluster HCCA: Cluster_54

Target Alias Description ECC score Gene Family Method Actions
AT1G32990 PRPL11 plastid ribosomal protein l11 0.18 OrthoFinder output from all 47 species
Adi_g019225 PRPL11 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g24656 PRPL11 component *(uL11c) of large plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Ala_g12058 PRPL11 component *(uL11c) of large plastid ribosomal-subunit... 0.08 OrthoFinder output from all 47 species
Als_g00538 PRPL11 component *(uL11c) of large plastid ribosomal-subunit... 0.09 OrthoFinder output from all 47 species
Aob_g13607 PRPL11 component *(uL11c) of large plastid ribosomal-subunit... 0.06 OrthoFinder output from all 47 species
Aop_g01017 PRPL11 component *(uL11c) of large plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Aspi01Gene51098.t1 PRPL11, Aspi01Gene51098 component *(uL11c) of large plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Azfi_s0591.g078746 PRPL11 component *(uL11c) of large plastid ribosomal-subunit... 0.12 OrthoFinder output from all 47 species
Cba_g10687 PRPL11 component *(uL11c) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Ceric.03G039700.1 PRPL11, Ceric.03G039700 component *(uL11c) of large plastid ribosomal-subunit... 0.07 OrthoFinder output from all 47 species
Dac_g28507 PRPL11 component *(uL11c) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Dde_g08872 PRPL11 component *(uL11c) of large plastid ribosomal-subunit... 0.07 OrthoFinder output from all 47 species
Ehy_g02085 PRPL11 component *(uL11c) of large plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
GSVIVT01019689001 PRPL11 Protein biosynthesis.organelle translation... 0.14 OrthoFinder output from all 47 species
Gb_12514 PRPL11 component psRPL11 of large ribosomal subunit proteome 0.14 OrthoFinder output from all 47 species
LOC_Os03g03020.1 PRPL11, LOC_Os03g03020 component psRPL11 of large ribosomal subunit proteome 0.18 OrthoFinder output from all 47 species
Len_g25437 PRPL11 component *(uL11c) of large plastid ribosomal-subunit... 0.07 OrthoFinder output from all 47 species
Lfl_g13039 PRPL11 component *(uL11c) of large plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
MA_26087g0010 PRPL11 50S ribosomal protein L11, chloroplastic OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_368887g0010 PRPL11 50S ribosomal protein L11, chloroplastic OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Mp7g12110.1 PRPL11 component psRPL11 of large ribosomal subunit proteome 0.24 OrthoFinder output from all 47 species
Nbi_g11504 PRPL11 component *(uL11c) of large plastid ribosomal-subunit... 0.09 OrthoFinder output from all 47 species
Pir_g17849 PRPL11 component *(uL11c) of large plastid ribosomal-subunit... 0.05 OrthoFinder output from all 47 species
Pp3c10_12450V3.1 PRPL11, Pp3c10_12450 plastid ribosomal protein l11 0.08 OrthoFinder output from all 47 species
Pp3c12_19370V3.1 PRPL11, Pp3c12_19370 plastid ribosomal protein l11 0.05 OrthoFinder output from all 47 species
Pp3c3_20370V3.1 PRPL11, Pp3c3_20370 plastid ribosomal protein l11 0.04 OrthoFinder output from all 47 species
Ppi_g00505 PRPL11 component *(uL11c) of large plastid ribosomal-subunit... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0122.g021434 PRPL11 component *(uL11c) of large plastid ribosomal-subunit... 0.11 OrthoFinder output from all 47 species
Sam_g06585 No alias component *(uL11c) of large plastid ribosomal-subunit... 0.11 OrthoFinder output from all 47 species
Smo230830 PRPL11 Protein biosynthesis.organelle translation... 0.02 OrthoFinder output from all 47 species
Solyc08g083350.4.1 PRPL11, Solyc08g083350 component psRPL11 of large ribosomal subunit proteome 0.18 OrthoFinder output from all 47 species
Spa_g16220 PRPL11 component *(uL11c) of large plastid ribosomal-subunit... 0.1 OrthoFinder output from all 47 species
Tin_g17431 PRPL11 component *(uL11c) of large plastid ribosomal-subunit... 0.12 OrthoFinder output from all 47 species
Zm00001e000163_P001 PRPL11, Zm00001e000163 component psRPL11 of large ribosomal subunit proteome 0.18 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
CC GO:0005622 intracellular anatomical structure IEP HCCA
MF GO:0015035 protein-disulfide reductase activity IEP HCCA
MF GO:0015036 disulfide oxidoreductase activity IEP HCCA
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
BP GO:0022613 ribonucleoprotein complex biogenesis IEP HCCA
BP GO:0042254 ribosome biogenesis IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
InterPro domains Description Start Stop
IPR020784 Ribosomal_L11_N 38 101
IPR020783 Ribosomal_L11_C 106 174
No external refs found!