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  5. Cre10.g425750

Cre10.g425750 (AtATG18a)


Aliases : AtATG18a

Description : Vesicle trafficking.autophagosome formation.ATG9-2-18 membrane shuttling complex.ATG18 component


Gene families : OG0000802 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000802_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre10.g425750

Target Alias Description ECC score Gene Family Method Actions
Ala_g01676 AtATG18a component *(ATG18) of autophagosome ATG9-2-18 membrane... 0.02 OrthoFinder output from all 47 species
Aop_g00678 ATG18D, ATATG18D component *(ATG18) of autophagosome ATG9-2-18 membrane... 0.03 OrthoFinder output from all 47 species
Aop_g06158 AtATG18a component *(ATG18) of autophagosome ATG9-2-18 membrane... 0.01 OrthoFinder output from all 47 species
Aspi01Gene64068.t1 AtATG18a, Aspi01Gene64068 component *(ATG18) of autophagosome ATG9-2-18 membrane... 0.02 OrthoFinder output from all 47 species
Aspi01Gene65700.t1 AtATG18a, Aspi01Gene65700 component *(ATG18) of autophagosome ATG9-2-18 membrane... 0.02 OrthoFinder output from all 47 species
Cba_g26260 AtATG18a component *(ATG18) of autophagosome ATG9-2-18 membrane... 0.03 OrthoFinder output from all 47 species
Ceric.10G051600.1 ATG18C,... component *(ATG18) of autophagosome ATG9-2-18 membrane... 0.05 OrthoFinder output from all 47 species
Ceric.1Z168800.1 ATG18D,... component *(ATG18) of autophagosome ATG9-2-18 membrane... 0.03 OrthoFinder output from all 47 species
Ceric.37G046000.1 AtATG18a, Ceric.37G046000 component *(ATG18) of autophagosome ATG9-2-18 membrane... 0.02 OrthoFinder output from all 47 species
Dcu_g05394 AtATG18a component *(ATG18) of autophagosome ATG9-2-18 membrane... 0.01 OrthoFinder output from all 47 species
Dde_g25529 AtATG18a component *(ATG18) of autophagosome ATG9-2-18 membrane... 0.01 OrthoFinder output from all 47 species
LOC_Os05g07710.3 ATG18D,... component ATG18 of autophagosome ATG9-2-18 membrane... 0.01 OrthoFinder output from all 47 species
Len_g04718 ATG18D, ATATG18D component *(ATG18) of autophagosome ATG9-2-18 membrane... 0.02 OrthoFinder output from all 47 species
MA_205985g0010 ATG18D, ATATG18D component ATG18 of autophagosome ATG9-2-18 membrane... 0.02 OrthoFinder output from all 47 species
Mp1g05420.1 AtATG18a component ATG18 of autophagosome ATG9-2-18 membrane... 0.02 OrthoFinder output from all 47 species
Msp_g06532 ATG18D, ATATG18D component *(ATG18) of autophagosome ATG9-2-18 membrane... 0.02 OrthoFinder output from all 47 species
Nbi_g02099 ATG18D, ATATG18D component *(ATG18) of autophagosome ATG9-2-18 membrane... 0.02 OrthoFinder output from all 47 species
Nbi_g02916 AtATG18a component *(ATG18) of autophagosome ATG9-2-18 membrane... 0.02 OrthoFinder output from all 47 species
Pir_g12916 AtATG18a component *(ATG18) of autophagosome ATG9-2-18 membrane... 0.01 OrthoFinder output from all 47 species
Pir_g18144 AtATG18a component *(ATG18) of autophagosome ATG9-2-18 membrane... 0.01 OrthoFinder output from all 47 species
Pir_g18881 AtATG18a component *(ATG18) of autophagosome ATG9-2-18 membrane... 0.01 OrthoFinder output from all 47 species
Pnu_g20599 ATG18D, ATATG18D component *(ATG18) of autophagosome ATG9-2-18 membrane... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0137.g022497 AtATG18a component *(ATG18) of autophagosome ATG9-2-18 membrane... 0.01 OrthoFinder output from all 47 species
Spa_g04557 AtATG18a component *(ATG18) of autophagosome ATG9-2-18 membrane... 0.02 OrthoFinder output from all 47 species
Spa_g09333 ATG18D, ATATG18D component *(ATG18) of autophagosome ATG9-2-18 membrane... 0.02 OrthoFinder output from all 47 species
Spa_g09790 AtATG18a component *(ATG18) of autophagosome ATG9-2-18 membrane... 0.02 OrthoFinder output from all 47 species
Spa_g47962 AtATG18a component *(ATG18) of autophagosome ATG9-2-18 membrane... 0.02 OrthoFinder output from all 47 species
Zm00001e028371_P001 AtATG18a, Zm00001e028371 component ATG18 of autophagosome ATG9-2-18 membrane... 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!