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  5. Cre10.g428200

Cre10.g428200


No description available


Gene families : OG0000120 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000120_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre10.g428200
Cluster HCCA: Cluster_12

Target Alias Description ECC score Gene Family Method Actions
AT5G40490 No alias RNA-binding (RRM/RBD/RNP motifs) family protein 0.02 OrthoFinder output from all 47 species
Adi_g054785 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g47700 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g13552 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g35979 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g08667 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g11244 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aop_g12817 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g02546 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g12118 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g15471 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.14G063200.1 Ceric.14G063200 not classified & original description: pacid=50633319... 0.03 OrthoFinder output from all 47 species
Dac_g03739 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g15425 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g10344 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
GSVIVT01032402001 No alias Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Gb_29426 No alias Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Gb_29428 No alias Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Gb_33485 No alias Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Gb_39961 No alias Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Len_g09242 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_93349g0010 No alias Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Msp_g08394 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g11046 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ore_g02719 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g31234 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g09717 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Pir_g11176 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g20108 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g26283 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Pir_g36034 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0055.g014397 No alias not classified & original description: CDS=1935-3293 0.01 OrthoFinder output from all 47 species
Sam_g11005 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g15652 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sam_g24620 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sam_g29327 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Smo4662 No alias Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Solyc02g093340.3.1 Solyc02g093340 Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Spa_g48980 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g57064 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e002844_P001 Zm00001e002844 Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... 0.01 OrthoFinder output from all 47 species
Zm00001e011415_P001 Zm00001e011415 Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Zm00001e033045_P001 Zm00001e033045 Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006644 phospholipid metabolic process IEP HCCA
BP GO:0006650 glycerophospholipid metabolic process IEP HCCA
BP GO:0006661 phosphatidylinositol biosynthetic process IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
BP GO:0008654 phospholipid biosynthetic process IEP HCCA
BP GO:0009966 regulation of signal transduction IEP HCCA
BP GO:0010646 regulation of cell communication IEP HCCA
BP GO:0023051 regulation of signaling IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0045017 glycerolipid biosynthetic process IEP HCCA
BP GO:0046474 glycerophospholipid biosynthetic process IEP HCCA
BP GO:0046486 glycerolipid metabolic process IEP HCCA
BP GO:0046488 phosphatidylinositol metabolic process IEP HCCA
BP GO:0046854 phosphatidylinositol phosphate biosynthetic process IEP HCCA
BP GO:0048583 regulation of response to stimulus IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 65 108
IPR000504 RRM_dom 147 194
No external refs found!