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  5. Cre10.g435450

Cre10.g435450 (GATA1)


Aliases : GATA1

Description : RNA biosynthesis.transcriptional activation.C2C2 superfamily.GATA transcription factor


Gene families : OG0000100 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000100_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre10.g435450
Cluster HCCA: Cluster_57

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00004p00074220 GATA4,... RNA biosynthesis.transcriptional activation.C2C2... 0.02 OrthoFinder output from all 47 species
AMTR_s00011p00253850 HAN, MNP,... RNA biosynthesis.transcriptional activation.C2C2... 0.02 OrthoFinder output from all 47 species
AT1G08000 GATA10 GATA transcription factor 10 0.02 OrthoFinder output from all 47 species
AT3G54810 BME3-ZF, BME3, GATA8 Plant-specific GATA-type zinc finger transcription... 0.02 OrthoFinder output from all 47 species
Adi_g010212 GATA5 transcription factor *(A/B-GATA) & original description: none 0.01 OrthoFinder output from all 47 species
Adi_g043911 GATA22, CGA1, GNL transcription factor *(A/B-GATA) & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g088428 GATA22, CGA1, GNL transcription factor *(A/B-GATA) & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g098113 No alias transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g108833 GATA4 transcription factor *(A/B-GATA) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g09936 GNC, GATA21 transcription factor *(A/B-GATA) & original description: none 0.01 OrthoFinder output from all 47 species
Als_g09937 GNC, GATA21 transcription factor *(A/B-GATA) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene12734.t1 GATA5, Aspi01Gene12734 transcription factor *(A/B-GATA) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene35992.t1 GATA23, Aspi01Gene35992 transcription factor *(A/B-GATA) & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0117.g046499 GATA2 transcription factor *(A/B-GATA) & original description:... 0.02 OrthoFinder output from all 47 species
Cba_g04557 GATA9 transcription factor *(A/B-GATA) & original description: none 0.01 OrthoFinder output from all 47 species
Cba_g15344 GATA15 transcription factor *(A/B-GATA) & original description: none 0.01 OrthoFinder output from all 47 species
Ceric.34G071700.1 GATA5, Ceric.34G071700 transcription factor *(A/B-GATA) & original description:... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020610.74 No alias No description available 0.02 OrthoFinder output from all 47 species
Dcu_g04522 GATA9 transcription factor *(A/B-GATA) & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g15306 GATA9 transcription factor *(A/B-GATA) & original description: none 0.01 OrthoFinder output from all 47 species
Dcu_g18881 GATA12 transcription factor *(A/B-GATA) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g02516 GATA4 transcription factor *(A/B-GATA) & original description: none 0.01 OrthoFinder output from all 47 species
Ehy_g14273 GATA4 transcription factor *(A/B-GATA) & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os02g56250.1 BME3-ZF, BME3,... transcription factor (GATA) 0.01 OrthoFinder output from all 47 species
LOC_Os05g06340.1 GATA23, LOC_Os05g06340 transcription factor (GATA) 0.02 OrthoFinder output from all 47 species
LOC_Os06g37450.1 GATA22, CGA1,... transcription factor (GATA) 0.02 OrthoFinder output from all 47 species
Pir_g37587 GATA15 transcription factor *(A/B-GATA) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g11160 GATA15 transcription factor *(A/B-GATA) & original description: none 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000079 GATA9 transcription factor *(A/B-GATA) & original description:... 0.02 OrthoFinder output from all 47 species
Sam_g39840 No alias transcription factor *(A/B-GATA) & original description: none 0.01 OrthoFinder output from all 47 species
Spa_g06254 GATA9 transcription factor *(A/B-GATA) & original description: none 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
MF GO:0043565 sequence-specific DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000394 RNA splicing, via endonucleolytic cleavage and ligation IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
BP GO:0006388 tRNA splicing, via endonucleolytic cleavage and ligation IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
InterPro domains Description Start Stop
IPR000679 Znf_GATA 380 414
No external refs found!