Description : Protein RMD5 homolog OS=Arabidopsis thaliana
Gene families : OG0002380 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002380_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Cre11.g467574 | |
| Cluster | HCCA: Cluster_62 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT2G22690 | No alias | zinc ion binding | 0.01 | OrthoFinder output from all 47 species | |
| Adi_g058123 | No alias | E3 ubiquitin ligase component *(GID2) of GID... | 0.01 | OrthoFinder output from all 47 species | |
| Adi_g106660 | No alias | E3 ubiquitin ligase component *(GID2) of GID... | 0.01 | OrthoFinder output from all 47 species | |
| Cba_g03104 | No alias | E3 ubiquitin ligase component *(GID2) of GID... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01038533001 | No alias | Protein RMD5 homolog OS=Arabidopsis thaliana | 0.02 | OrthoFinder output from all 47 species | |
| Mp5g12080.1 | No alias | catalytic component GID2 of ubiquitin protein ligase complex | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g18852 | No alias | E3 ubiquitin ligase component *(GID2) of GID... | 0.01 | OrthoFinder output from all 47 species | |
| Pir_g10216 | No alias | E3 ubiquitin ligase component *(GID2) of GID... | 0.01 | OrthoFinder output from all 47 species | |
| Ppi_g04368 | No alias | E3 ubiquitin ligase component *(GID2) of GID... | 0.01 | OrthoFinder output from all 47 species | |
| Sam_g07675 | No alias | E3 ubiquitin ligase component *(GID2) of GID... | 0.01 | OrthoFinder output from all 47 species | |
| Spa_g00372 | No alias | E3 ubiquitin ligase component *(GID2) of GID... | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003690 | double-stranded DNA binding | IEP | HCCA |
| MF | GO:0004842 | ubiquitin-protein transferase activity | IEP | HCCA |
| MF | GO:0005543 | phospholipid binding | IEP | HCCA |
| MF | GO:0008234 | cysteine-type peptidase activity | IEP | HCCA |
| MF | GO:0008289 | lipid binding | IEP | HCCA |
| MF | GO:0019787 | ubiquitin-like protein transferase activity | IEP | HCCA |
| MF | GO:0035091 | phosphatidylinositol binding | IEP | HCCA |
| MF | GO:0050662 | obsolete coenzyme binding | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR024964 | CTLH/CRA | 144 | 333 |
| No external refs found! |
