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  5. Cre12.g487850

Cre12.g487850 (ATARFB1B, ARFB1B)


Aliases : ATARFB1B, ARFB1B

Description : Vesicle trafficking.Coat protein I (COPI) coatomer machinery.coat protein recruiting.ARF-GTPase


Gene families : OG0000301 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000301_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre12.g487850
Cluster HCCA: Cluster_21

Target Alias Description ECC score Gene Family Method Actions
Adi_g009714 ATARFA1F, ARFA1F ARF-GTPase *(ARF1) & original description: none 0.01 OrthoFinder output from all 47 species
Adi_g024167 ATARFA1B, ARFA1B ARF-GTPase *(ARF1) & original description: none 0.01 OrthoFinder output from all 47 species
Adi_g098748 ATARFA1B, ARFA1B ARF-GTPase *(ARF1) & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g11192 ATARFA1B, ARFA1B ARF-GTPase *(ARF1) & original description: none 0.01 OrthoFinder output from all 47 species
Ala_g30565 ATARFA1F, ARFA1F ARF-GTPase *(ARF1) & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.1Z028400.1 ATARFA1F,... ARF-GTPase *(ARF1) & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.24G027800.1 ATARFA1F,... not classified & original description: pacid=50629141... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000663.21 ATARFA1F, ARFA1F Vesicle trafficking.Coat protein I (COPI) coatomer... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021127.129 ARFA1E, ATARFA1E Vesicle trafficking.Coat protein I (COPI) coatomer... 0.02 OrthoFinder output from all 47 species
Gb_07391 ATARFA1F, ARFA1F ARF-GTPase 0.01 OrthoFinder output from all 47 species
LOC_Os01g16030.1 ATARFA1B,... ARF-GTPase 0.02 OrthoFinder output from all 47 species
Lfl_g36422 ATARFB1B, ARFB1B ARF-GTPase *(ARFA) & original description: none 0.01 OrthoFinder output from all 47 species
Nbi_g15667 ATARFA1F, ARFA1F ARF-GTPase *(ARF1) & original description: none 0.01 OrthoFinder output from all 47 species
Zm00001e011790_P001 ATARFA1B,... ARF-GTPase 0.01 OrthoFinder output from all 47 species
Zm00001e015538_P002 ATARFB1B,... ARF-GTPase 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEP HCCA
InterPro domains Description Start Stop
IPR006689 Small_GTPase_ARF/SAR 6 176
No external refs found!