Cre12.g498600

Description : Elongation factor 1-alpha OS=Glycine max

Gene families : OG0000296 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000296_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cre12.g498600
Cluster	HCCA: Cluster_74

Target	Alias	Description	ECC score	Gene Family Method
AT5G60390	No alias	GTP binding Elongation factor Tu family protein	0.02	OrthoFinder output from all 47 species
Adi_g055048	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ala_g31488	No alias	aminoacyl-tRNA binding factor *(eEF1A)) & original...	0.01	OrthoFinder output from all 47 species
Als_g11645	No alias	aminoacyl-tRNA binding factor *(eEF1A)) & original...	0.01	OrthoFinder output from all 47 species
Aop_g20702	No alias	aminoacyl-tRNA binding factor *(eEF1A)) & original...	0.01	OrthoFinder output from all 47 species
Azfi_s0291.g063341	No alias	aminoacyl-tRNA binding factor *(eEF1A)) & original...	0.01	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00021352.57	No alias	Protein biosynthesis.translation elongation.eEF1A...	0.04	OrthoFinder output from all 47 species
Dac_g22627	No alias	aminoacyl-tRNA binding factor *(eEF1A)) & original...	0.01	OrthoFinder output from all 47 species
Dac_g40329	No alias	aminoacyl-tRNA binding factor *(eEF1A)) & original...	0.01	OrthoFinder output from all 47 species
Ehy_g06792	No alias	aminoacyl-tRNA binding factor *(eEF1A)) & original...	0.02	OrthoFinder output from all 47 species
LOC_Os03g08010.1	LOC_Os03g08010	aminoacyl-tRNA binding factor (eEF1A)	0.01	OrthoFinder output from all 47 species
LOC_Os03g08020.1	LOC_Os03g08020	aminoacyl-tRNA binding factor (eEF1A)	0.01	OrthoFinder output from all 47 species
LOC_Os03g08050.1	LOC_Os03g08050	aminoacyl-tRNA binding factor (eEF1A)	0.01	OrthoFinder output from all 47 species
Lfl_g17369	No alias	not classified & original description: none	0.01	OrthoFinder output from all 47 species
Lfl_g22816	No alias	aminoacyl-tRNA binding factor *(eEF1A)) & original...	0.01	OrthoFinder output from all 47 species
Mp3g23400.1	No alias	aminoacyl-tRNA binding factor (eEF1A)	0.01	OrthoFinder output from all 47 species
Msp_g29578	No alias	not classified & original description: none	0.01	OrthoFinder output from all 47 species
Nbi_g08139	No alias	aminoacyl-tRNA binding factor *(eEF1A)) & original...	0.02	OrthoFinder output from all 47 species
Pp3c2_6770V3.1	Pp3c2_6770	GTP binding Elongation factor Tu family protein	0.01	OrthoFinder output from all 47 species
Ppi_g29939	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Sam_g16997	No alias	aminoacyl-tRNA binding factor *(eEF1A)) & original...	0.02	OrthoFinder output from all 47 species
Sam_g16999	No alias	aminoacyl-tRNA binding factor *(eEF1A)) & original...	0.02	OrthoFinder output from all 47 species
Sam_g28089	No alias	not classified & original description: none	0.01	OrthoFinder output from all 47 species
Sam_g29350	No alias	aminoacyl-tRNA binding factor *(eEF1A)) & original...	0.02	OrthoFinder output from all 47 species
Sam_g39768	No alias	aminoacyl-tRNA binding factor *(eEF1A)) & original...	0.02	OrthoFinder output from all 47 species
Sam_g49146	No alias	not classified & original description: none	0.01	OrthoFinder output from all 47 species
Spa_g08926	No alias	aminoacyl-tRNA binding factor *(eEF1A)) & original...	0.02	OrthoFinder output from all 47 species
Spa_g24424	No alias	aminoacyl-tRNA binding factor *(eEF1A)) & original...	0.02	OrthoFinder output from all 47 species
Spa_g24425	No alias	aminoacyl-tRNA binding factor *(eEF1A)) & original...	0.02	OrthoFinder output from all 47 species
Spa_g50273	No alias	aminoacyl-tRNA binding factor *(eEF1A)) & original...	0.02	OrthoFinder output from all 47 species
Zm00001e026762_P001	Zm00001e026762	aminoacyl-tRNA binding factor (eEF1A)	0.03	OrthoFinder output from all 47 species
Zm00001e026763_P003	Zm00001e026763	aminoacyl-tRNA binding factor (eEF1A)	0.03	OrthoFinder output from all 47 species
Zm00001e031390_P004	Zm00001e031390	aminoacyl-tRNA binding factor (eEF1A)	0.03	OrthoFinder output from all 47 species
Zm00001e031391_P002	Zm00001e031391	aminoacyl-tRNA binding factor (eEF1A)	0.03	OrthoFinder output from all 47 species
Zm00001e031407_P001	Zm00001e031407	aminoacyl-tRNA binding factor (eEF1A)	0.03	OrthoFinder output from all 47 species
Zm00001e037355_P001	Zm00001e037355	aminoacyl-tRNA binding factor (eEF1A)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003924	GTPase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004356	glutamate-ammonia ligase activity	IEP	HCCA
BP	GO:0006082	organic acid metabolic process	IEP	HCCA
BP	GO:0006520	amino acid metabolic process	IEP	HCCA
BP	GO:0006541	glutamine metabolic process	IEP	HCCA
BP	GO:0006542	glutamine biosynthetic process	IEP	HCCA
BP	GO:0008652	amino acid biosynthetic process	IEP	HCCA
BP	GO:0009064	glutamine family amino acid metabolic process	IEP	HCCA
BP	GO:0009084	glutamine family amino acid biosynthetic process	IEP	HCCA
BP	GO:0016053	organic acid biosynthetic process	IEP	HCCA
MF	GO:0016211	ammonia ligase activity	IEP	HCCA
MF	GO:0016874	ligase activity	IEP	HCCA
MF	GO:0016879	ligase activity, forming carbon-nitrogen bonds	IEP	HCCA
MF	GO:0016880	acid-ammonia (or amide) ligase activity	IEP	HCCA
BP	GO:0019752	carboxylic acid metabolic process	IEP	HCCA
BP	GO:0043436	oxoacid metabolic process	IEP	HCCA
BP	GO:0044283	small molecule biosynthetic process	IEP	HCCA
BP	GO:0046394	carboxylic acid biosynthetic process	IEP	HCCA
BP	GO:1901566	organonitrogen compound biosynthetic process	IEP	HCCA
BP	GO:1901605	alpha-amino acid metabolic process	IEP	HCCA
BP	GO:1901607	alpha-amino acid biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR004161	EFTu-like_2	312	384
IPR000795	T_Tr_GTP-bd_dom	44	283
IPR004160	Transl_elong_EFTu/EF1A_C	393	499

External Links

No external refs found!

Cre12.g498600

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation