Cre12.g501200 (ASK2, SKP1B)

Aliases : ASK2, SKP1B

Description : Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.Cullin-based ubiquitylation complexes.SKP1-CUL1-FBX (SCF) E3 ligase complexes.SKP1/ASK1 target protein binding component

Gene families : OG0000379 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000379_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cre12.g501200
Cluster	HCCA: Cluster_33

Target	Alias	Description	ECC score	Gene Family Method
AT5G42190	ASK2, SKP1B	E3 ubiquitin ligase SCF complex subunit SKP1/ASK1 family protein	0.02	OrthoFinder output from all 47 species
Adi_g000276	ASK1, ATSKP1,...	ASK-type linker component of SCF E3 ubiquitin ligase...	0.02	OrthoFinder output from all 47 species
Adi_g100138	ASK1, ATSKP1,...	ASK-type linker component of SCF E3 ubiquitin ligase...	0.02	OrthoFinder output from all 47 species
Ala_g24676	ASK2, SKP1B	ASK-type linker component of SCF E3 ubiquitin ligase...	0.02	OrthoFinder output from all 47 species
Als_g19030	ASK2, SKP1B	ASK-type linker component of SCF E3 ubiquitin ligase...	0.03	OrthoFinder output from all 47 species
Als_g50355	ASK11, SK11	ASK-type linker component of SCF E3 ubiquitin ligase...	0.02	OrthoFinder output from all 47 species
Aop_g03068	ASK1, ATSKP1,...	ASK-type linker component of SCF E3 ubiquitin ligase...	0.01	OrthoFinder output from all 47 species
Aop_g41044	ASK14, SK14	ASK-type linker component of SCF E3 ubiquitin ligase...	0.02	OrthoFinder output from all 47 species
Aop_g43697	ASK1, ATSKP1,...	ASK-type linker component of SCF E3 ubiquitin ligase...	0.01	OrthoFinder output from all 47 species
Cba_g46809	ASK1, ATSKP1,...	ASK-type linker component of SCF E3 ubiquitin ligase...	0.03	OrthoFinder output from all 47 species
Ceric.03G062100.1	ASK2, SKP1B,...	ASK-type linker component of SCF E3 ubiquitin ligase...	0.02	OrthoFinder output from all 47 species
Ceric.18G083400.1	ASK2, SKP1B,...	ASK-type linker component of SCF E3 ubiquitin ligase...	0.03	OrthoFinder output from all 47 species
Dac_g26382	ASK1, ATSKP1,...	ASK-type linker component of SCF E3 ubiquitin ligase...	0.02	OrthoFinder output from all 47 species
GSVIVT01009967001	ASK2, SKP1B	Protein degradation.peptide tagging.Ubiquitin...	0.02	OrthoFinder output from all 47 species
GSVIVT01024013001	ASK1, ATSKP1,...	Protein degradation.peptide tagging.Ubiquitin...	0.02	OrthoFinder output from all 47 species
GSVIVT01024017001	ASK1, ATSKP1,...	Protein degradation.peptide tagging.Ubiquitin...	0.02	OrthoFinder output from all 47 species
Gb_07362	ASK2, SKP1B	target protein binding component SKP1/ASK1 of...	0.02	OrthoFinder output from all 47 species
LOC_Os11g26910.1	ASK2, SKP1B,...	target protein binding component SKP1/ASK1 of...	0.01	OrthoFinder output from all 47 species
Pir_g32738	ASK2, SKP1B	ASK-type linker component of SCF E3 ubiquitin ligase...	0.02	OrthoFinder output from all 47 species
Ppi_g24039	ASK11, SK11	ASK-type linker component of SCF E3 ubiquitin ligase...	0.02	OrthoFinder output from all 47 species
Spa_g25527	ASK1, ATSKP1,...	ASK-type linker component of SCF E3 ubiquitin ligase...	0.02	OrthoFinder output from all 47 species
Tin_g10059	ASK1, ATSKP1,...	ASK-type linker component of SCF E3 ubiquiTin ligase...	0.02	OrthoFinder output from all 47 species
Tin_g25305	ASK1, ATSKP1,...	ASK-type linker component of SCF E3 ubiquiTin ligase...	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0006508	proteolysis	None	Extended
BP	GO:0006511	ubiquitin-dependent protein catabolic process	IEA	Interproscan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009057	macromolecule catabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0019941	modification-dependent protein catabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043632	modification-dependent macromolecule catabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044248	cellular catabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044265	cellular macromolecule catabolic process	None	Extended
BP	GO:0051603	proteolysis involved in protein catabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901575	organic substance catabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003676	nucleic acid binding	IEP	HCCA
MF	GO:0003924	GTPase activity	IEP	HCCA
MF	GO:0005525	GTP binding	IEP	HCCA
MF	GO:0019001	guanyl nucleotide binding	IEP	HCCA
MF	GO:0032561	guanyl ribonucleotide binding	IEP	HCCA
MF	GO:0043565	sequence-specific DNA binding	IEP	HCCA
MF	GO:0097159	organic cyclic compound binding	IEP	HCCA
MF	GO:1901363	heterocyclic compound binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR016072	Skp1_comp_dimer	108	155
IPR016073	Skp1_comp_POZ	4	62

External Links

No external refs found!

Cre12.g501200 (ASK2, SKP1B)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation