Cre12.g558250


No description available


Gene families : OG0002049 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002049_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre12.g558250

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00044p00158440 evm_27.TU.AmTr_v1... No description available 0.01 OrthoFinder output from all 47 species
Adi_g083853 No alias regulatory protein *(TMS) of vesicle trafficking &... 0.02 OrthoFinder output from all 47 species
Als_g09960 No alias regulatory protein *(TMS) of vesicle trafficking &... 0.02 OrthoFinder output from all 47 species
Aob_g10691 No alias regulatory protein *(TMS) of vesicle trafficking &... 0.01 OrthoFinder output from all 47 species
Azfi_s0006.g010274 No alias regulatory protein *(TMS) of vesicle trafficking &... 0.02 OrthoFinder output from all 47 species
Dde_g04947 No alias regulatory protein *(TMS) of vesicle trafficking &... 0.02 OrthoFinder output from all 47 species
GSVIVT01032802001 No alias No description available 0.03 OrthoFinder output from all 47 species
Lfl_g02377 No alias regulatory protein *(TMS) of vesicle trafficking &... 0.02 OrthoFinder output from all 47 species
MA_40641g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_7753240g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Pir_g15140 No alias regulatory protein *(TMS) of vesicle trafficking &... 0.02 OrthoFinder output from all 47 species
Ppi_g56455 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g08073 No alias regulatory protein *(TMS) of vesicle trafficking &... 0.02 OrthoFinder output from all 47 species
Solyc09g005600.3.1 Solyc09g005600 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Spa_g05717 No alias regulatory protein *(TMS) of vesicle trafficking &... 0.02 OrthoFinder output from all 47 species
Tin_g10054 No alias regulatory protein *(TMS) of vesicle trafficking &... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0016192 vesicle-mediated transport IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0001510 RNA methylation IEP HCCA
MF GO:0004356 glutamate-ammonia ligase activity IEP HCCA
CC GO:0005856 cytoskeleton IEP HCCA
CC GO:0005885 Arp2/3 protein complex IEP HCCA
BP GO:0007015 actin filament organization IEP HCCA
BP GO:0008064 regulation of actin polymerization or depolymerization IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
BP GO:0009452 7-methylguanosine RNA capping IEP HCCA
CC GO:0015629 actin cytoskeleton IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016211 ammonia ligase activity IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP HCCA
BP GO:0030832 regulation of actin filament length IEP HCCA
BP GO:0030833 regulation of actin filament polymerization IEP HCCA
BP GO:0032259 methylation IEP HCCA
BP GO:0032271 regulation of protein polymerization IEP HCCA
BP GO:0032535 regulation of cellular component size IEP HCCA
BP GO:0032956 regulation of actin cytoskeleton organization IEP HCCA
BP GO:0032970 regulation of actin filament-based process IEP HCCA
BP GO:0033043 regulation of organelle organization IEP HCCA
BP GO:0034314 Arp2/3 complex-mediated actin nucleation IEP HCCA
BP GO:0036260 RNA capping IEP HCCA
BP GO:0043248 proteasome assembly IEP HCCA
BP GO:0043254 regulation of protein-containing complex assembly IEP HCCA
BP GO:0043414 macromolecule methylation IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0044087 regulation of cellular component biogenesis IEP HCCA
BP GO:0045010 actin nucleation IEP HCCA
BP GO:0051128 regulation of cellular component organization IEP HCCA
BP GO:0051493 regulation of cytoskeleton organization IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065008 regulation of biological quality IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:0090066 regulation of anatomical structure size IEP HCCA
BP GO:0097435 supramolecular fiber organization IEP HCCA
BP GO:0110053 regulation of actin filament organization IEP HCCA
BP GO:1902903 regulation of supramolecular fiber organization IEP HCCA
InterPro domains Description Start Stop
IPR001388 Synaptobrevin-like 1391 1450
No external refs found!