Description : Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana
Gene families : OG0000120 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000120_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Cre12.g560300 | |
| Cluster | HCCA: Cluster_31 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Adi_g018550 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g057517 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Adi_g064547 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g068319 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Adi_g085912 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g110734 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g11244 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Aspi01Gene26402.t1 | Aspi01Gene26402 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene42378.t2 | Aspi01Gene42378 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0704.g082656 | No alias | not classified & original description: CDS=748-2211 | 0.01 | OrthoFinder output from all 47 species | |
| Ceric.23G034800.1 | Ceric.23G034800 | not classified & original description: pacid=50611547... | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g15425 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g14502 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01030040001 | No alias | Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g11176 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003824 | catalytic activity | IEP | HCCA |
| MF | GO:0004408 | holocytochrome-c synthase activity | IEP | HCCA |
| MF | GO:0004812 | aminoacyl-tRNA ligase activity | IEP | HCCA |
| CC | GO:0005737 | cytoplasm | IEP | HCCA |
| CC | GO:0005739 | mitochondrion | IEP | HCCA |
| BP | GO:0006418 | tRNA aminoacylation for protein translation | IEP | HCCA |
| BP | GO:0006720 | isoprenoid metabolic process | IEP | HCCA |
| BP | GO:0008299 | isoprenoid biosynthetic process | IEP | HCCA |
| MF | GO:0008483 | transaminase activity | IEP | HCCA |
| BP | GO:0008610 | lipid biosynthetic process | IEP | HCCA |
| MF | GO:0015930 | glutamate synthase activity | IEP | HCCA |
| MF | GO:0016624 | oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor | IEP | HCCA |
| MF | GO:0016638 | oxidoreductase activity, acting on the CH-NH2 group of donors | IEP | HCCA |
| MF | GO:0016769 | transferase activity, transferring nitrogenous groups | IEP | HCCA |
| MF | GO:0016846 | carbon-sulfur lyase activity | IEP | HCCA |
| MF | GO:0016875 | ligase activity, forming carbon-oxygen bonds | IEP | HCCA |
| MF | GO:0016903 | oxidoreductase activity, acting on the aldehyde or oxo group of donors | IEP | HCCA |
| MF | GO:0019842 | vitamin binding | IEP | HCCA |
| MF | GO:0030170 | pyridoxal phosphate binding | IEP | HCCA |
| BP | GO:0043038 | amino acid activation | IEP | HCCA |
| BP | GO:0043039 | tRNA aminoacylation | IEP | HCCA |
| MF | GO:0070279 | vitamin B6 binding | IEP | HCCA |
| MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | HCCA |
| No external refs found! |
