Aliases : ATSS3, SS3
Description : Carbohydrate metabolism.starch metabolism.synthesis.starch synthase activities.SSIII-type starch synthase
Gene families : OG0000693 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000693_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Cre13.g579598 | |
| Cluster | HCCA: Cluster_74 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00025p00214840 | ATSS4, SS4,... | Probable starch synthase 4, chloroplastic/amyloplastic... | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g05532 | ATSS4, SS4, SSIV | starch synthase *(SS4) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g17843 | ATSS4, SS4, SSIV | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g02255 | ATSS4, SS4, SSIV | starch synthase *(SS4) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g05284 | ATSS3, SS3 | starch synthase *(SS3) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene43820.t1 | ATSS4, SS4,... | starch synthase *(SS4) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g26958 | ATSS3, SS3 | starch synthase *(SS3) & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Ceric.01G125000.1 | ATSS4, SS4,... | starch synthase *(SS4) & original description:... | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g10971 | ATSS4, SS4, SSIV | starch synthase *(SS4) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g01991 | ATSS4, SS4, SSIV | starch synthase *(SS5) & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Dde_g14950 | ATSS4, SS4, SSIV | starch synthase *(SS4) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g43255 | ATSS4, SS4, SSIV | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g50824 | ATSS3, SS3 | starch synthase *(SS3) & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Ehy_g20658 | ATSS4, SS4, SSIV | starch synthase *(SS4) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01032233001 | ATSS4, SS4, SSIV | Probable starch synthase 4, chloroplastic/amyloplastic... | 0.03 | OrthoFinder output from all 47 species | |
| Len_g49747 | ATSS4, SS4, SSIV | starch synthase *(SS5) & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Lfl_g04240 | ATSS4, SS4, SSIV | starch synthase *(SS4) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Mp1g14910.1 | ATSS4, SS4, SSIV | starch synthase (SSIV) | 0.03 | OrthoFinder output from all 47 species | |
| Mp2g20000.1 | ATSS3, SS3 | starch synthase (SSIII) | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g03742 | ATSS4, SS4, SSIV | starch synthase *(SS5) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g02313 | ATSS3, SS3 | starch synthase *(SS3) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pir_g15562 | ATSS4, SS4, SSIV | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g07616 | ATSS4, SS4, SSIV | starch synthase *(SS4) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g51042 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Smo92017 | ATSS4, SS4, SSIV | Carbohydrate metabolism.starch... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc02g080570.3.1 | ATSS3, SS3,... | starch synthase (SSIII) | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g10367 | ATSS4, SS4, SSIV | starch synthase *(SS4) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g17570 | ATSS3, SS3 | starch synthase *(SS3) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g19219 | ATSS4, SS4, SSIV | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e027473_P001 | ATSS4, SS4,... | starch synthase (SSIV) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e041682_P002 | ATSS3, SS3,... | starch synthase (SSIII) | 0.01 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0006163 | purine nucleotide metabolic process | IEP | HCCA |
| BP | GO:0006164 | purine nucleotide biosynthetic process | IEP | HCCA |
| BP | GO:0006188 | IMP biosynthetic process | IEP | HCCA |
| BP | GO:0006189 | 'de novo' IMP biosynthetic process | IEP | HCCA |
| BP | GO:0006753 | nucleoside phosphate metabolic process | IEP | HCCA |
| BP | GO:0009117 | nucleotide metabolic process | IEP | HCCA |
| BP | GO:0009123 | nucleoside monophosphate metabolic process | IEP | HCCA |
| BP | GO:0009124 | nucleoside monophosphate biosynthetic process | IEP | HCCA |
| BP | GO:0009126 | purine nucleoside monophosphate metabolic process | IEP | HCCA |
| BP | GO:0009127 | purine nucleoside monophosphate biosynthetic process | IEP | HCCA |
| BP | GO:0009150 | purine ribonucleotide metabolic process | IEP | HCCA |
| BP | GO:0009152 | purine ribonucleotide biosynthetic process | IEP | HCCA |
| BP | GO:0009156 | ribonucleoside monophosphate biosynthetic process | IEP | HCCA |
| BP | GO:0009161 | ribonucleoside monophosphate metabolic process | IEP | HCCA |
| BP | GO:0009165 | nucleotide biosynthetic process | IEP | HCCA |
| BP | GO:0009167 | purine ribonucleoside monophosphate metabolic process | IEP | HCCA |
| BP | GO:0009168 | purine ribonucleoside monophosphate biosynthetic process | IEP | HCCA |
| BP | GO:0009259 | ribonucleotide metabolic process | IEP | HCCA |
| BP | GO:0009260 | ribonucleotide biosynthetic process | IEP | HCCA |
| BP | GO:0019693 | ribose phosphate metabolic process | IEP | HCCA |
| MF | GO:0030246 | carbohydrate binding | IEP | HCCA |
| MF | GO:0030247 | polysaccharide binding | IEP | HCCA |
| BP | GO:0046040 | IMP metabolic process | IEP | HCCA |
| BP | GO:0046390 | ribose phosphate biosynthetic process | IEP | HCCA |
| BP | GO:0072521 | purine-containing compound metabolic process | IEP | HCCA |
| BP | GO:0072522 | purine-containing compound biosynthetic process | IEP | HCCA |
| BP | GO:0090407 | organophosphate biosynthetic process | IEP | HCCA |
| BP | GO:1901135 | carbohydrate derivative metabolic process | IEP | HCCA |
| BP | GO:1901137 | carbohydrate derivative biosynthetic process | IEP | HCCA |
| BP | GO:1901293 | nucleoside phosphate biosynthetic process | IEP | HCCA |
| MF | GO:2001070 | starch binding | IEP | HCCA |
| No external refs found! |
