Cre14.g621351 (RSH3, AT-RSH3, ATRSH3)

Aliases : RSH3, AT-RSH3, ATRSH3

Description : Probable GTP diphosphokinase RSH3, chloroplastic OS=Arabidopsis thaliana

Gene families : OG0006425 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006425_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cre14.g621351
Cluster	HCCA: Cluster_62

Target	Alias	Description	ECC score	Gene Family Method
Aspi01Gene53681.t1	Aspi01Gene53681	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Smo152204	AT-RSH2, ATRSH2, RSH2	Probable GTP diphosphokinase RSH2, chloroplastic...	0.01	OrthoFinder output from all 47 species
Zm00001e023299_P002	RSH3, AT-RSH3,...	Probable GTP diphosphokinase RSH3, chloroplastic...	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006163	purine nucleotide metabolic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006753	nucleoside phosphate metabolic process	None	Extended
BP	GO:0006793	phosphorus metabolic process	None	Extended
BP	GO:0006796	phosphate-containing compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009117	nucleotide metabolic process	None	Extended
BP	GO:0009150	purine ribonucleotide metabolic process	None	Extended
BP	GO:0009259	ribonucleotide metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015969	guanosine tetraphosphate metabolic process	IEA	Interproscan
BP	GO:0019637	organophosphate metabolic process	None	Extended
BP	GO:0019693	ribose phosphate metabolic process	None	Extended
BP	GO:0033865	nucleoside bisphosphate metabolic process	None	Extended
BP	GO:0033875	ribonucleoside bisphosphate metabolic process	None	Extended
BP	GO:0034032	purine nucleoside bisphosphate metabolic process	None	Extended
BP	GO:0034035	purine ribonucleoside bisphosphate metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0055086	nucleobase-containing small molecule metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0072521	purine-containing compound metabolic process	None	Extended
BP	GO:1901135	carbohydrate derivative metabolic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004222	metalloendopeptidase activity	IEP	HCCA
MF	GO:0005515	protein binding	IEP	HCCA
MF	GO:0008237	metallopeptidase activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003607	HD/PDEase_dom	86	255
IPR007685	RelA_SpoT	976	1094

External Links

No external refs found!

Cre14.g621351 (RSH3, AT-RSH3, ATRSH3)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation