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  5. Cre14.g629300

Cre14.g629300 (UBP23)


Aliases : UBP23

Description : Protein degradation.peptidase families.cysteine-type peptidase activities.ubiquitin-specific protease


Gene families : OG0000320 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000320_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre14.g629300
Cluster HCCA: Cluster_53

Target Alias Description ECC score Gene Family Method Actions
Adi_g080212 UBP23 deubiquitinase *(UBP23) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g113813 UBP20 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Adi_g114935 UBP23 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g09377 UBP23 deubiquitinase *(UBP23) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g19936 UBP25 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene00562.t1 UBP25, Aspi01Gene00562 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene49835.t1 UBP18, Aspi01Gene49835 deubiquitinase *(UBP15-21) & original description: none 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000663.67 UBP15 Protein degradation.peptidase families.cysteine-type... 0.01 OrthoFinder output from all 47 species
Dac_g01006 UBP25 deubiquitinase *(UBP25) & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g23037 UBP23 deubiquitinase *(UBP23) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g09670 UBP25 deubiquitinase *(UBP25) & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01001911001 No alias No description available 0.04 OrthoFinder output from all 47 species
GSVIVT01001912001 UBP23 Protein degradation.peptidase families.cysteine-type... 0.02 OrthoFinder output from all 47 species
Gb_28125 UBP25 deubiquitinase (UBP25) 0.04 OrthoFinder output from all 47 species
MA_10429414g0020 UBP18 deubiquitinase (UBP15-21) 0.01 OrthoFinder output from all 47 species
MA_132593g0020 UBP23 Ubiquitin carboxyl-terminal hydrolase 23 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Mp3g16110.1 UBP23 deubiquitinase (UBP23) 0.06 OrthoFinder output from all 47 species
Msp_g15993 UBP23 deubiquitinase *(UBP23) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g29923 UBP23 deubiquitinase *(UBP23) & original description: none 0.01 OrthoFinder output from all 47 species
Ore_g29641 UBP25 deubiquitinase *(UBP25) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g09289 No alias deubiquitinase *(UBP23) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g50169 No alias deubiquitinase *(UBP15-21) & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g26124 UBP23 deubiquitinase *(UBP23) & original description: none 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0016579 protein deubiquitination IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
CC GO:0005730 nucleolus IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
MF GO:0008134 transcription factor binding IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
CC GO:0030684 preribosome IEP HCCA
CC GO:0032040 small-subunit processome IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR001394 Peptidase_C19_UCH 102 416
No external refs found!