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  5. Cre16.g661450

Cre16.g661450


Description : Cell cycle.mitosis and meiosis.chromosome segregation.centromere assembly and maintenance.CENH3 histone H3 variant


Gene families : OG0000128 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000128_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre16.g661450

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00240080 No alias Chromatin organisation.histones.H3-type histone 0.02 OrthoFinder output from all 47 species
AMTR_s00018p00168040 No alias Chromatin organisation.histones.H3-type histone 0.04 OrthoFinder output from all 47 species
AMTR_s00030p00044250 No alias Chromatin organisation.histones.H3-type histone 0.03 OrthoFinder output from all 47 species
AT1G09200 No alias Histone superfamily protein 0.04 OrthoFinder output from all 47 species
AT3G27360 No alias Histone superfamily protein 0.07 OrthoFinder output from all 47 species
AT4G40030 No alias Histone superfamily protein 0.02 OrthoFinder output from all 47 species
AT4G40040 No alias Histone superfamily protein 0.02 OrthoFinder output from all 47 species
AT5G10390 No alias Histone superfamily protein 0.07 OrthoFinder output from all 47 species
AT5G10400 No alias Histone superfamily protein 0.04 OrthoFinder output from all 47 species
AT5G65360 No alias Histone superfamily protein 0.04 OrthoFinder output from all 47 species
Aev_g08007 No alias histone *(H3) & original description: none 0.01 OrthoFinder output from all 47 species
Ala_g26587 No alias histone *(H3) & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g30174 No alias histone *(H3) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g00133 No alias histone H3 variant *(CENH3) & original description: none 0.01 OrthoFinder output from all 47 species
Aop_g33085 No alias histone *(H3) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene42452.t1 Aspi01Gene42452 histone H3 variant *(CENH3) & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.1Z281000.1 Ceric.1Z281000 not classified & original description: pacid=50607784... 0.02 OrthoFinder output from all 47 species
Ceric.1Z286600.1 Ceric.1Z286600 not classified & original description: pacid=50632714... 0.02 OrthoFinder output from all 47 species
Ceric.22G049100.1 Ceric.22G049100 histone H3 variant *(CENH3) & original description:... 0.06 OrthoFinder output from all 47 species
Ceric.24G002400.1 Ceric.24G002400 histone *(H3) & original description: pacid=50629579... 0.02 OrthoFinder output from all 47 species
Dac_g02480 No alias histone *(H3) & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g12416 No alias histone *(H3) & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g11158 No alias histone *(H3) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01026582001 No alias Histone H3.2 OS=Pisum sativum 0.04 OrthoFinder output from all 47 species
GSVIVT01027073001 HTR12, CENH3 Cell cycle.mitosis and meiosis.chromosome... 0.04 OrthoFinder output from all 47 species
GSVIVT01034510001 No alias Histone H3.2 OS=Pisum sativum 0.02 OrthoFinder output from all 47 species
Gb_04505 No alias histone (H3) 0.02 OrthoFinder output from all 47 species
Gb_27618 No alias histone (H3) 0.05 OrthoFinder output from all 47 species
Gb_29026 No alias histone (H3) 0.01 OrthoFinder output from all 47 species
Gb_29027 No alias histone (H3) 0.04 OrthoFinder output from all 47 species
Gb_36661 No alias histone (H3) 0.02 OrthoFinder output from all 47 species
LOC_Os01g64640.1 LOC_Os01g64640 histone (H3) 0.06 OrthoFinder output from all 47 species
LOC_Os04g34240.1 LOC_Os04g34240 histone (H3) 0.03 OrthoFinder output from all 47 species
LOC_Os05g36280.1 LOC_Os05g36280 histone (H3) 0.09 OrthoFinder output from all 47 species
LOC_Os05g41080.1 LOC_Os05g41080 histone H3 variant (CENH3) 0.08 OrthoFinder output from all 47 species
LOC_Os06g04030.1 LOC_Os06g04030 histone (H3) 0.01 OrthoFinder output from all 47 species
LOC_Os06g06510.1 LOC_Os06g06510 histone (H3) 0.05 OrthoFinder output from all 47 species
LOC_Os11g05730.1 LOC_Os11g05730 histone (H3) 0.05 OrthoFinder output from all 47 species
Len_g04468 No alias histone *(H3) & original description: none 0.02 OrthoFinder output from all 47 species
MA_350032g0010 No alias histone (H3) 0.02 OrthoFinder output from all 47 species
MA_56411g0010 No alias histone (H3) 0.03 OrthoFinder output from all 47 species
Mp3g07730.1 No alias histone (H3) 0.02 OrthoFinder output from all 47 species
Msp_g36081 No alias histone *(H3) & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g41988 No alias histone *(H3) & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0012.g005529 No alias not classified & original description: CDS=1-426 0.02 OrthoFinder output from all 47 species
Sam_g20165 No alias histone H3 variant *(CENH3) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g22036 No alias histone *(H3) & original description: none 0.04 OrthoFinder output from all 47 species
Solyc01g074000.3.1 Solyc01g074000 histone (H3) 0.06 OrthoFinder output from all 47 species
Solyc01g079110.4.1 Solyc01g079110 histone (H3) 0.06 OrthoFinder output from all 47 species
Solyc01g080600.4.1 Solyc01g080600 histone (H3) 0.06 OrthoFinder output from all 47 species
Solyc01g086820.4.1 Solyc01g086820 histone (H3) 0.07 OrthoFinder output from all 47 species
Solyc01g095650.4.1 HTR12, CENH3,... histone H3 variant (CENH3) 0.01 OrthoFinder output from all 47 species
Solyc02g077480.1.1 Solyc02g077480 histone (H3) 0.07 OrthoFinder output from all 47 species
Solyc05g051500.4.1 Solyc05g051500 histone (H3) 0.02 OrthoFinder output from all 47 species
Spa_g27650 No alias histone *(H3) & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g42522 No alias histone *(H3) & original description: none 0.09 OrthoFinder output from all 47 species
Spa_g52113 No alias histone *(H3) & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g52114 No alias histone *(H3) & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g56118 No alias histone *(H3) & original description: none 0.08 OrthoFinder output from all 47 species
Tin_g03087 No alias histone *(H3) & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e001885_P003 Zm00001e001885 histone (H3) 0.05 OrthoFinder output from all 47 species
Zm00001e007951_P001 Zm00001e007951 histone (H3) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEA Interproscan
MF GO:0003677 DNA binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0005737 cytoplasm IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
InterPro domains Description Start Stop
IPR007125 Histone_H2A/H2B/H3 27 147
No external refs found!