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  5. Cre16.g675246

Cre16.g675246 (EBS)


Aliases : EBS

Description : Chromatin organisation.histone modifications.histone deacetylation.SHL1 histone deacetylation complex recruiting protein


Gene families : OG0000671 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000671_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre16.g675246
Cluster HCCA: Cluster_73

Target Alias Description ECC score Gene Family Method Actions
Adi_g025693 EBS component *(SHL/EBS) of PRC1 complex & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g05843 EBS component *(SHL/EBS) of PRC1 complex & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g49712 EBS component *(SHL/EBS) of PRC1 complex & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.16G056300.1 EBS, Ceric.16G056300 component *(SHL/EBS) of PRC1 complex & original... 0.02 OrthoFinder output from all 47 species
LOC_Os03g58530.1 EBS, LOC_Os03g58530 component BAH of BAH-EMF1 Polycomb silencing complex 0.02 OrthoFinder output from all 47 species
Lfl_g06920 EBS component *(SHL/EBS) of PRC1 complex & original description: none 0.01 OrthoFinder output from all 47 species
MA_498317g0010 EBS component BAH of BAH-EMF1 Polycomb silencing complex 0.02 OrthoFinder output from all 47 species
Ppi_g06722 EBS component *(SHL/EBS) of PRC1 complex & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0041.g012510 EBS component *(SHL/EBS) of PRC1 complex & original... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0156.g023635 EBS component *(SHL/EBS) of PRC1 complex & original... 0.02 OrthoFinder output from all 47 species
Smo412601 EBS Chromatin organisation.histone modifications.histone... 0.02 OrthoFinder output from all 47 species
Solyc05g042030.3.1 EBS, Solyc05g042030 component BAH of BAH-EMF1 Polycomb silencing complex 0.01 OrthoFinder output from all 47 species
Tin_g12128 EBS component *(SHL/EBS) of PRC1 complex & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000347 THO complex IEP HCCA
CC GO:0000445 THO complex part of transcription export complex IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR001025 BAH_dom 17 132
IPR019787 Znf_PHD-finger 137 184
No external refs found!