Cre17.g725200 (PGP11)

Aliases : PGP11

Description : ABC transporter B family member 12 OS=Arabidopsis thaliana

Gene families : OG0000048 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cre17.g725200
Cluster	HCCA: Cluster_57

Target	Alias	Description	ECC score	Gene Family Method
AT1G28010	ABCB14, ATABCB14, PGP14	P-glycoprotein 14	0.01	OrthoFinder output from all 47 species
Als_g51317	ABCB19,...	ABC-B-type transporter *(AMN3) & original description: none	0.01	OrthoFinder output from all 47 species
Aob_g12898	PGP2	subfamily ABCB transporter & original description: none	0.01	OrthoFinder output from all 47 species
Aob_g16050	PGP2	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Cba_g16249	ABCB19,...	subfamily ABCB transporter & original description: none	0.01	OrthoFinder output from all 47 species
Cba_g24784	ABCB19,...	subfamily ABCB transporter & original description: none	0.01	OrthoFinder output from all 47 species
Dac_g35769	PGP11	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Dcu_g08511	PGP11	not classified & original description: none	0.02	OrthoFinder output from all 47 species
GSVIVT01009946001	ABCB14, ATABCB14, PGP14	Solute transport.primary active transport.ABC...	0.02	OrthoFinder output from all 47 species
Gb_27774	ALS1, ATTAP2, TAP2	ABC transporter B family member 25 OS=Oryza sativa...	0.01	OrthoFinder output from all 47 species
LOC_Os01g50080.1	ATPGP4, PGP4,...	subfamily ABCB transporter	0.01	OrthoFinder output from all 47 species
LOC_Os08g45030.1	PGP1, ABCB1,...	subfamily ABCB transporter	0.01	OrthoFinder output from all 47 species
Lfl_g03498	PGP2	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Mp3g11830.1	ABCB19,...	auxin efflux transporter (ABCB19). subfamily ABCB transporter	0.03	OrthoFinder output from all 47 species
Mp7g04390.1	ATPGP4, PGP4, ABCB4, MDR4	subfamily ABCB transporter	0.02	OrthoFinder output from all 47 species
Msp_g01686	PGP6	subfamily ABCB transporter & original description: none	0.01	OrthoFinder output from all 47 species
Nbi_g19754	ABCB19,...	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Nbi_g24809	PGP2	not classified & original description: none	0.01	OrthoFinder output from all 47 species
Pir_g14316	PGP2	subfamily ABCB transporter & original description: none	0.01	OrthoFinder output from all 47 species
Pir_g42899	No alias	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Pnu_g05161	PGP20	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ppi_g22415	ABCB19,...	not classified & original description: none	0.01	OrthoFinder output from all 47 species
Smo176522	ATPGP4, PGP4, ABCB4, MDR4	Solute transport.primary active transport.ABC...	0.01	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATP hydrolysis activity	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003700	DNA-binding transcription factor activity	IEP	HCCA
BP	GO:0006355	regulation of DNA-templated transcription	IEP	HCCA
BP	GO:0009889	regulation of biosynthetic process	IEP	HCCA
BP	GO:0010468	regulation of gene expression	IEP	HCCA
BP	GO:0010556	regulation of macromolecule biosynthetic process	IEP	HCCA
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	IEP	HCCA
BP	GO:0019222	regulation of metabolic process	IEP	HCCA
BP	GO:0031323	regulation of cellular metabolic process	IEP	HCCA
BP	GO:0031326	regulation of cellular biosynthetic process	IEP	HCCA
MF	GO:0043565	sequence-specific DNA binding	IEP	HCCA
BP	GO:0050789	regulation of biological process	IEP	HCCA
BP	GO:0050794	regulation of cellular process	IEP	HCCA
BP	GO:0051171	regulation of nitrogen compound metabolic process	IEP	HCCA
BP	GO:0051252	regulation of RNA metabolic process	IEP	HCCA
BP	GO:0060255	regulation of macromolecule metabolic process	IEP	HCCA
BP	GO:0065007	biological regulation	IEP	HCCA
BP	GO:0080090	regulation of primary metabolic process	IEP	HCCA
MF	GO:0140110	transcription regulator activity	IEP	HCCA
BP	GO:1903506	regulation of nucleic acid-templated transcription	IEP	HCCA
BP	GO:2001141	regulation of RNA biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003439	ABC_transporter-like_ATP-bd	1182	1330
IPR011527	ABC1_TM_dom	839	1112
IPR011527	ABC1_TM_dom	60	331
IPR003439	ABC_transporter-like_ATP-bd	451	599

External Links

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Cre17.g725200 (PGP11)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation