1. Home
  2. Species
  3. Chlamydomonas reinhardtii
  4. Sequence
  5. Cre17.g728400

Cre17.g728400 (PEN3, ABCG36, ATPDR8,...)


Aliases : PEN3, ABCG36, ATPDR8, ATABCG36, PDR8

Description : Pleiotropic drug resistance protein 3 OS=Nicotiana tabacum


Gene families : OG0000071 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000071_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre17.g728400
Cluster HCCA: Cluster_17

Target Alias Description ECC score Gene Family Method Actions
Aob_g22545 PDR6, ATPDR6 subfamily ABCG transporter & original description: none 0.01 OrthoFinder output from all 47 species
Aop_g63006 PDR6, ATPDR6 subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene01667.t1 ABCG40, PDR12,... subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g24379 PEN3, ABCG36,... subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g08318 PDR11, ATPDR11 subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g28400 ABCG40, PDR12,... subfamily ABCG transporter & original description: none 0.01 OrthoFinder output from all 47 species
GSVIVT01034746001 PDR6, ATPDR6 Solute transport.primary active transport.ABC... 0.01 OrthoFinder output from all 47 species
Gb_34646 PDR4, ATPDR4 cuticular lipid exporter (PEC1). subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
LOC_Os02g11760.1 ABCG40, PDR12,... subfamily ABCG transporter 0.01 OrthoFinder output from all 47 species
Len_g35849 PEN3, ABCG36,... subfamily ABCG transporter & original description: none 0.01 OrthoFinder output from all 47 species
MA_10426781g0010 PDR4, ATPDR4 subfamily ABCG transporter 0.01 OrthoFinder output from all 47 species
MA_135152g0010 PEN3, ABCG36,... subfamily ABCG transporter 0.01 OrthoFinder output from all 47 species
Msp_g14770 PEN3, ABCG36,... subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g22919 ABCG40, PDR12,... subfamily ABCG transporter & original description: none 0.01 OrthoFinder output from all 47 species
Pir_g18638 PEN3, ABCG36,... subfamily ABCG transporter & original description: none 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0010.g004796 PDR6, ATPDR6 subfamily ABCG transporter & original description: CDS=1-4422 0.01 OrthoFinder output from all 47 species
Solyc05g018510.3.1 PDR4, ATPDR4,... cuticular lipid exporter (PEC1). subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
Solyc06g065670.4.1 PDR4, ATPDR4,... cuticular lipid exporter (PEC1). subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
Solyc09g042300.2.1 ATPDR3, PDR3,... ABC transporter G family member 31 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Spa_g10501 PDR6, ATPDR6 subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g50979 PEN3, ABCG36,... subfamily ABCG transporter & original description: none 0.01 OrthoFinder output from all 47 species
Spa_g56174 ABCG40, PDR12,... subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e024257_P001 PDR11, ATPDR11,... subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0003887 DNA-directed DNA polymerase activity IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0034061 DNA polymerase activity IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR013525 ABC_2_trans 821 1028
IPR013525 ABC_2_trans 1918 2130
No external refs found!