Description : component *(uL1c) of large plastid ribosomal-subunit proteome & original description: none
Gene families : OG0002232 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002232_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00107p00035950 | evm_27.TU.AmTr_v1... | Protein biosynthesis.organelle translation... | 0.04 | OrthoFinder output from all 47 species | |
| AT3G63490 | No alias | Ribosomal protein L1p/L10e family | 0.05 | OrthoFinder output from all 47 species | |
| Adi_g083284 | No alias | component *(uL1c) of large plastid ribosomal-subunit... | 0.07 | OrthoFinder output from all 47 species | |
| Aev_g11306 | No alias | component *(uL1c) of large plastid ribosomal-subunit... | 0.09 | OrthoFinder output from all 47 species | |
| Ala_g13358 | No alias | component *(uL1c) of large plastid ribosomal-subunit... | 0.1 | OrthoFinder output from all 47 species | |
| Aob_g31675 | No alias | component *(uL1c) of large plastid ribosomal-subunit... | 0.09 | OrthoFinder output from all 47 species | |
| Aop_g11179 | No alias | component *(uL1c) of large plastid ribosomal-subunit... | 0.08 | OrthoFinder output from all 47 species | |
| Azfi_s0065.g035757 | No alias | component *(uL1c) of large plastid ribosomal-subunit... | 0.05 | OrthoFinder output from all 47 species | |
| Cba_g25894 | No alias | component *(uL1c) of large plastid ribosomal-subunit... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.36G042400.1 | Ceric.36G042400 | component *(uL1c) of large plastid ribosomal-subunit... | 0.06 | OrthoFinder output from all 47 species | |
| Cre02.g088900 | No alias | Protein biosynthesis.organelle translation... | 0.05 | OrthoFinder output from all 47 species | |
| Dcu_g06155 | No alias | component *(uL1c) of large plastid ribosomal-subunit... | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01020727001 | No alias | Protein biosynthesis.organelle translation... | 0.01 | OrthoFinder output from all 47 species | |
| GSVIVT01032196001 | No alias | Protein biosynthesis.organelle translation... | 0.09 | OrthoFinder output from all 47 species | |
| Gb_16169 | No alias | component psRPL1 of large ribosomal subunit proteome | 0.11 | OrthoFinder output from all 47 species | |
| LOC_Os05g32220.1 | LOC_Os05g32220 | component psRPL1 of large ribosomal subunit proteome | 0.07 | OrthoFinder output from all 47 species | |
| Len_g24587 | No alias | component *(uL1c) of large plastid ribosomal-subunit... | 0.06 | OrthoFinder output from all 47 species | |
| Lfl_g03897 | No alias | component *(uL1c) of large plastid ribosomal-subunit... | 0.05 | OrthoFinder output from all 47 species | |
| Lfl_g19309 | No alias | component *(uL1c) of large plastid ribosomal-subunit... | 0.06 | OrthoFinder output from all 47 species | |
| MA_10002614g0010 | No alias | 50S ribosomal protein L1, chloroplastic OS=Arabidopsis... | 0.1 | OrthoFinder output from all 47 species | |
| MA_310797g0010 | No alias | 50S ribosomal protein L1, chloroplastic OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
| Mp1g07500.1 | No alias | component psRPL1 of large ribosomal subunit proteome | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g11958 | No alias | component *(uL1c) of large plastid ribosomal-subunit... | 0.07 | OrthoFinder output from all 47 species | |
| Ore_g28354 | No alias | component *(uL1c) of large plastid ribosomal-subunit... | 0.07 | OrthoFinder output from all 47 species | |
| Pir_g01275 | No alias | component *(uL1c) of large plastid ribosomal-subunit... | 0.06 | OrthoFinder output from all 47 species | |
| Pp3c23_11170V3.1 | Pp3c23_11170 | Ribosomal protein L1p/L10e family | 0.01 | OrthoFinder output from all 47 species | |
| Ppi_g41124 | No alias | component *(uL1c) of large plastid ribosomal-subunit... | 0.08 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0154.g023589 | No alias | component *(uL1c) of large plastid ribosomal-subunit... | 0.06 | OrthoFinder output from all 47 species | |
| Smo143134 | No alias | Protein biosynthesis.organelle translation... | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g16769 | No alias | component *(uL1c) of large plastid ribosomal-subunit... | 0.14 | OrthoFinder output from all 47 species | |
| Tin_g00638 | No alias | component *(uL1c) of large plastid ribosomal-subunit... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e031570_P001 | Zm00001e031570 | component psRPL1 of large ribosomal subunit proteome | 0.06 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | HCCA |
| BP | GO:0003333 | amino acid transmembrane transport | IEP | HCCA |
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003824 | catalytic activity | IEP | HCCA |
| MF | GO:0004332 | fructose-bisphosphate aldolase activity | IEP | HCCA |
| MF | GO:0004812 | aminoacyl-tRNA ligase activity | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| MF | GO:0005525 | GTP binding | IEP | HCCA |
| BP | GO:0006082 | organic acid metabolic process | IEP | HCCA |
| BP | GO:0006090 | pyruvate metabolic process | IEP | HCCA |
| BP | GO:0006091 | generation of precursor metabolites and energy | IEP | HCCA |
| BP | GO:0006096 | glycolytic process | IEP | HCCA |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006163 | purine nucleotide metabolic process | IEP | HCCA |
| BP | GO:0006165 | nucleoside diphosphate phosphorylation | IEP | HCCA |
| BP | GO:0006399 | tRNA metabolic process | IEP | HCCA |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
| BP | GO:0006753 | nucleoside phosphate metabolic process | IEP | HCCA |
| BP | GO:0006757 | ATP generation from ADP | IEP | HCCA |
| BP | GO:0006865 | amino acid transport | IEP | HCCA |
| BP | GO:0009117 | nucleotide metabolic process | IEP | HCCA |
| BP | GO:0009132 | nucleoside diphosphate metabolic process | IEP | HCCA |
| BP | GO:0009135 | purine nucleoside diphosphate metabolic process | IEP | HCCA |
| BP | GO:0009141 | nucleoside triphosphate metabolic process | IEP | HCCA |
| BP | GO:0009144 | purine nucleoside triphosphate metabolic process | IEP | HCCA |
| BP | GO:0009150 | purine ribonucleotide metabolic process | IEP | HCCA |
| BP | GO:0009179 | purine ribonucleoside diphosphate metabolic process | IEP | HCCA |
| BP | GO:0009185 | ribonucleoside diphosphate metabolic process | IEP | HCCA |
| BP | GO:0009199 | ribonucleoside triphosphate metabolic process | IEP | HCCA |
| BP | GO:0009205 | purine ribonucleoside triphosphate metabolic process | IEP | HCCA |
| BP | GO:0009259 | ribonucleotide metabolic process | IEP | HCCA |
| BP | GO:0015849 | organic acid transport | IEP | HCCA |
| BP | GO:0016052 | carbohydrate catabolic process | IEP | HCCA |
| MF | GO:0016491 | oxidoreductase activity | IEP | HCCA |
| MF | GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors | IEP | HCCA |
| MF | GO:0016616 | oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | IEP | HCCA |
| MF | GO:0016651 | oxidoreductase activity, acting on NAD(P)H | IEP | HCCA |
| MF | GO:0016655 | oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | IEP | HCCA |
| MF | GO:0016830 | carbon-carbon lyase activity | IEP | HCCA |
| MF | GO:0016832 | aldehyde-lyase activity | IEP | HCCA |
| MF | GO:0016874 | ligase activity | IEP | HCCA |
| MF | GO:0016875 | ligase activity, forming carbon-oxygen bonds | IEP | HCCA |
| MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
| MF | GO:0019001 | guanyl nucleotide binding | IEP | HCCA |
| BP | GO:0019693 | ribose phosphate metabolic process | IEP | HCCA |
| BP | GO:0019752 | carboxylic acid metabolic process | IEP | HCCA |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
| MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
| MF | GO:0032561 | guanyl ribonucleotide binding | IEP | HCCA |
| BP | GO:0032787 | monocarboxylic acid metabolic process | IEP | HCCA |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0034660 | ncRNA metabolic process | IEP | HCCA |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
| MF | GO:0036094 | small molecule binding | IEP | HCCA |
| BP | GO:0043038 | amino acid activation | IEP | HCCA |
| BP | GO:0043039 | tRNA aminoacylation | IEP | HCCA |
| MF | GO:0043167 | ion binding | IEP | HCCA |
| MF | GO:0043168 | anion binding | IEP | HCCA |
| BP | GO:0043436 | oxoacid metabolic process | IEP | HCCA |
| BP | GO:0044281 | small molecule metabolic process | IEP | HCCA |
| BP | GO:0046031 | ADP metabolic process | IEP | HCCA |
| BP | GO:0046034 | ATP metabolic process | IEP | HCCA |
| BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
| BP | GO:0046939 | nucleotide phosphorylation | IEP | HCCA |
| MF | GO:0051287 | NAD binding | IEP | HCCA |
| BP | GO:0072521 | purine-containing compound metabolic process | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
| MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | HCCA |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
| BP | GO:1903825 | organic acid transmembrane transport | IEP | HCCA |
| BP | GO:1905039 | carboxylic acid transmembrane transport | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR028364 | Ribosomal_L1/biogenesis | 138 | 328 |
| No external refs found! |
