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  5. Dac_g01043

Dac_g01043 (EMB2780)


Aliases : EMB2780

Description : EC_2.7 transferase transferring phosphorus-containing group & original description: none


Gene families : OG0002006 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002006_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dac_g01043

Target Alias Description ECC score Gene Family Method Actions
AT5G63960 EMB2780 DNA binding;nucleotide binding;nucleic acid... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001545.7 EMB2780 Cell cycle.interphase.DNA replication.elongation.DNA... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020539.8 EMB2780 DNA polymerase delta catalytic subunit OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species
Cre01.g015250 EMB2780 Cell cycle.interphase.DNA replication.elongation.DNA... 0.06 OrthoFinder output from all 47 species
Gb_15178 EMB2780 DNA polymerase delta catalytic subunit OS=Glycine max... 0.03 OrthoFinder output from all 47 species
Gb_15179 EMB2780 DNA polymerase delta catalytic subunit OS=Oryza sativa... 0.04 OrthoFinder output from all 47 species
Gb_15180 EMB2780 component POLD1 of DNA polymerase delta complex 0.03 OrthoFinder output from all 47 species
LOC_Os11g08330.1 EMB2780, LOC_Os11g08330 component POLD1 of DNA polymerase delta complex 0.03 OrthoFinder output from all 47 species
Mp4g05690.1 EMB2780 component POLD1 of DNA polymerase delta complex 0.05 OrthoFinder output from all 47 species
Pnu_g07497 EMB2780 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c10_11570V3.1 EMB2780, Pp3c10_11570 DNA binding;nucleotide binding;nucleic acid... 0.03 OrthoFinder output from all 47 species
Pp3c1_290V3.1 EMB2780, Pp3c1_290 DNA binding;nucleotide binding;nucleic acid... 0.02 OrthoFinder output from all 47 species
Pp3c25_2990V3.1 EMB2780, Pp3c25_2990 DNA binding;nucleotide binding;nucleic acid... 0.01 OrthoFinder output from all 47 species
Zm00001e024553_P001 EMB2780, Zm00001e024553 component POLD1 of DNA polymerase delta complex 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEA Interproscan
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006298 mismatch repair IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0030983 mismatched DNA binding IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR025687 Znf-C4pol 997 1068
IPR006134 DNA-dir_DNA_pol_B_multi_dom 527 960
IPR006133 DNA-dir_DNA_pol_B_exonuc 120 463
No external refs found!