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  5. Dac_g01991

Dac_g01991


Description : histone H3 variant *(CENH3) & original description: none


Gene families : OG0000128 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000128_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dac_g01991
Cluster HCCA: Cluster_176

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00018p00168390 No alias Histone H3.2 OS=Pisum sativum 0.03 OrthoFinder output from all 47 species
Ala_g12785 No alias histone H3 variant *(CENH3) & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g26587 No alias histone *(H3) & original description: none 0.01 OrthoFinder output from all 47 species
Aop_g07784 No alias histone *(H3) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g19848 No alias histone *(H3) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g33085 No alias histone *(H3) & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene01942.t1 Aspi01Gene01942 histone *(H3) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene02058.t1 Aspi01Gene02058 histone *(H3) & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene42452.t1 Aspi01Gene42452 histone H3 variant *(CENH3) & original description: none 0.01 OrthoFinder output from all 47 species
Cba_g02423 No alias histone H3 variant *(CENH3) & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.1Z281000.1 Ceric.1Z281000 not classified & original description: pacid=50607784... 0.06 OrthoFinder output from all 47 species
Ceric.27G024400.1 Ceric.27G024400 histone *(H3) & original description: pacid=50605092... 0.05 OrthoFinder output from all 47 species
Dac_g02480 No alias histone *(H3) & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g04344 No alias histone *(H3) & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g12416 No alias histone *(H3) & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g01832 No alias histone *(H3) & original description: none 0.01 OrthoFinder output from all 47 species
Dde_g20346 No alias histone *(H3) & original description: none 0.03 OrthoFinder output from all 47 species
Len_g00883 No alias histone *(H3) & original description: none 0.02 OrthoFinder output from all 47 species
Len_g05015 No alias histone *(H3) & original description: none 0.02 OrthoFinder output from all 47 species
Len_g06032 No alias histone *(H3) & original description: none 0.01 OrthoFinder output from all 47 species
MA_74555g0010 No alias Histone H3.2 OS=Pisum sativum (sp|p68427|h32_pea : 98.2) 0.02 OrthoFinder output from all 47 species
Nbi_g01691 No alias histone H3 variant *(CENH3) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g09484 No alias histone *(H3) & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g074000.3.1 Solyc01g074000 histone (H3) 0.04 OrthoFinder output from all 47 species
Solyc01g079110.4.1 Solyc01g079110 histone (H3) 0.02 OrthoFinder output from all 47 species
Solyc01g080600.4.1 Solyc01g080600 histone (H3) 0.03 OrthoFinder output from all 47 species
Solyc01g086820.4.1 Solyc01g086820 histone (H3) 0.02 OrthoFinder output from all 47 species
Solyc02g077480.1.1 Solyc02g077480 histone (H3) 0.03 OrthoFinder output from all 47 species
Spa_g33395 No alias histone *(H3) & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g03087 No alias histone *(H3) & original description: none 0.01 OrthoFinder output from all 47 species
Tin_g22408 No alias histone *(H3) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g43939 No alias histone *(H3) & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR007125 Histone_H2A/H2B/H3 47 162
No external refs found!