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  5. Dac_g02533

Dac_g02533


Description : component *(eS19) of small ribosomal-subunit (SSU) proteome & original description: none


Gene families : OG0000873 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000873_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dac_g02533

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00045p00207750 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.small subunit... 0.04 OrthoFinder output from all 47 species
AMTR_s00110p00069670 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.small subunit... 0.06 OrthoFinder output from all 47 species
AT3G02080 No alias Ribosomal protein S19e family protein 0.11 OrthoFinder output from all 47 species
AT5G15520 No alias Ribosomal protein S19e family protein 0.03 OrthoFinder output from all 47 species
AT5G61170 No alias Ribosomal protein S19e family protein 0.1 OrthoFinder output from all 47 species
Adi_g107544 No alias component *(eS19) of small ribosomal-subunit (SSU)... 0.04 OrthoFinder output from all 47 species
Als_g07025 No alias component *(eS19) of small ribosomal-subunit (SSU)... 0.06 OrthoFinder output from all 47 species
Aop_g00927 No alias component *(eS19) of small ribosomal-subunit (SSU)... 0.06 OrthoFinder output from all 47 species
Azfi_s0007.g011210 No alias component *(eS19) of small ribosomal-subunit (SSU)... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021017.6 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.08 OrthoFinder output from all 47 species
Cre02.g106600 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.08 OrthoFinder output from all 47 species
Dcu_g30993 No alias component *(eS19) of small ribosomal-subunit (SSU)... 0.04 OrthoFinder output from all 47 species
GSVIVT01012199001 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.08 OrthoFinder output from all 47 species
LOC_Os03g31090.1 LOC_Os03g31090 component RPS19 of SSU proteome 0.08 OrthoFinder output from all 47 species
Lfl_g15415 No alias component *(eS19) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Lfl_g31872 No alias component *(eS19) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
MA_10427917g0010 No alias component RPS19 of SSU proteome 0.05 OrthoFinder output from all 47 species
MA_9301411g0010 No alias component RPS19 of SSU proteome 0.02 OrthoFinder output from all 47 species
Mp1g27380.1 No alias component RPS19 of SSU proteome 0.06 OrthoFinder output from all 47 species
Msp_g37856 No alias component *(eS19) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Msp_g43925 No alias component *(eS19) of small ribosomal-subunit (SSU)... 0.05 OrthoFinder output from all 47 species
Nbi_g03378 No alias component *(eS19) of small ribosomal-subunit (SSU)... 0.04 OrthoFinder output from all 47 species
Nbi_g27238 No alias component *(eS19) of small ribosomal-subunit (SSU)... 0.06 OrthoFinder output from all 47 species
Ore_g34855 No alias component *(eS19) of small ribosomal-subunit (SSU)... 0.04 OrthoFinder output from all 47 species
Pp3c14_19640V3.1 Pp3c14_19640 Ribosomal protein S19e family protein 0.05 OrthoFinder output from all 47 species
Pp3c17_15200V3.1 Pp3c17_15200 Ribosomal protein S19e family protein 0.03 OrthoFinder output from all 47 species
Pp3c1_28780V3.1 Pp3c1_28780 Ribosomal protein S19e family protein 0.06 OrthoFinder output from all 47 species
Pp3c2_10060V3.1 Pp3c2_10060 Ribosomal protein S19e family protein 0.05 OrthoFinder output from all 47 species
Ppi_g00396 No alias component *(eS19) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0100.g019638 No alias component *(eS19) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Sam_g12907 No alias component *(eS19) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Sam_g14851 No alias component *(eS19) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Sam_g22603 No alias component *(eS19) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Sam_g31814 No alias component *(eS19) of small ribosomal-subunit (SSU)... 0.06 OrthoFinder output from all 47 species
Smo153225 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.06 OrthoFinder output from all 47 species
Solyc03g115360.3.1 Solyc03g115360 component RPS19 of SSU proteome 0.09 OrthoFinder output from all 47 species
Solyc12g039120.2.1 Solyc12g039120 component RPS19 of SSU proteome 0.08 OrthoFinder output from all 47 species
Spa_g02912 No alias component *(eS19) of small ribosomal-subunit (SSU)... 0.04 OrthoFinder output from all 47 species
Spa_g11663 No alias component *(eS19) of small ribosomal-subunit (SSU)... 0.06 OrthoFinder output from all 47 species
Spa_g41565 No alias component *(eS19) of small ribosomal-subunit (SSU)... 0.07 OrthoFinder output from all 47 species
Tin_g14125 No alias component *(eS19) of small ribosomal-subunit (SSU)... 0.05 OrthoFinder output from all 47 species
Zm00001e002011_P001 Zm00001e002011 component RPS19 of SSU proteome 0.07 OrthoFinder output from all 47 species
Zm00001e038053_P003 Zm00001e038053 component RPS19 of SSU proteome 0.08 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0004455 ketol-acid reductoisomerase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0009081 branched-chain amino acid metabolic process IEP HCCA
BP GO:0009082 branched-chain amino acid biosynthetic process IEP HCCA
CC GO:0016272 prefoldin complex IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0044183 protein folding chaperone IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140662 ATP-dependent protein folding chaperone IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR001266 Ribosomal_S19e 6 139
No external refs found!