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  5. Dac_g02900

Dac_g02900 (APUM12, PUM12)


Aliases : APUM12, PUM12

Description : not classified & original description: none


Gene families : OG0000858 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000858_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dac_g02900

Target Alias Description ECC score Gene Family Method Actions
Cba_g15341 APUM12, PUM12 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g06465 APUM12, PUM12 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g13713 APUM12, PUM12 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g04830 APUM12, PUM12 not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_6394g0010 APUM12, PUM12 Pumilio homolog 12 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Nbi_g18965 APUM12, PUM12 not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004556 alpha-amylase activity IEP HCCA
MF GO:0004611 phosphoenolpyruvate carboxykinase activity IEP HCCA
BP GO:0006099 tricarboxylic acid cycle IEP HCCA
MF GO:0008964 phosphoenolpyruvate carboxylase activity IEP HCCA
BP GO:0015977 carbon fixation IEP HCCA
MF GO:0016160 amylase activity IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
InterPro domains Description Start Stop
IPR000571 Znf_CCCH 448 469
IPR001313 Pumilio_RNA-bd_rpt 576 610
IPR001313 Pumilio_RNA-bd_rpt 761 778
IPR001313 Pumilio_RNA-bd_rpt 688 718
IPR001313 Pumilio_RNA-bd_rpt 612 642
IPR001313 Pumilio_RNA-bd_rpt 797 829
IPR001313 Pumilio_RNA-bd_rpt 650 680
IPR001313 Pumilio_RNA-bd_rpt 723 756
No external refs found!