Aliases : SGR4, ZIG1, VTI1A, ATVTI11, VTI11, ZIG, ATVTI1A
Description : Qb-type VTI-group component of SNARE membrane fusion complex & original description: none
Gene families : OG0002267 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002267_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Dac_g04060 | |
| Cluster | HCCA: Cluster_112 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Adi_g008512 | SGR4, ZIG1,... | Qb-type VTI-group component of SNARE membrane fusion... | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g30123 | ATVTI13, VTI13 | Qb-type VTI-group component of SNARE membrane fusion... | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g00227 | SGR4, ZIG1,... | Qb-type VTI-group component of SNARE membrane fusion... | 0.03 | OrthoFinder output from all 47 species | |
| Pp3c11_5240V3.1 | ATVTI13, VTI13,... | Vesicle transport v-SNARE family protein | 0.01 | OrthoFinder output from all 47 species | |
| Smo146421 | SGR4, ZIG1,... | Vesicle trafficking.SNARE target membrane recognition... | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g48510 | SGR4, ZIG1,... | Qb-type VTI-group component of SNARE membrane fusion... | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g06403 | ATVTI13, VTI13 | Qb-type VTI-group component of SNARE membrane fusion... | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0006886 | intracellular protein transport | IEA | Interproscan |
| CC | GO:0016020 | membrane | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | HCCA |
| MF | GO:0003824 | catalytic activity | IEP | HCCA |
| MF | GO:0003924 | GTPase activity | IEP | HCCA |
| MF | GO:0005525 | GTP binding | IEP | HCCA |
| BP | GO:0005996 | monosaccharide metabolic process | IEP | HCCA |
| BP | GO:0006006 | glucose metabolic process | IEP | HCCA |
| MF | GO:0016462 | pyrophosphatase activity | IEP | HCCA |
| MF | GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors | IEP | HCCA |
| MF | GO:0016787 | hydrolase activity | IEP | HCCA |
| MF | GO:0016817 | hydrolase activity, acting on acid anhydrides | IEP | HCCA |
| MF | GO:0016818 | hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | IEP | HCCA |
| MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
| MF | GO:0017111 | ribonucleoside triphosphate phosphatase activity | IEP | HCCA |
| MF | GO:0019001 | guanyl nucleotide binding | IEP | HCCA |
| BP | GO:0019318 | hexose metabolic process | IEP | HCCA |
| MF | GO:0019899 | enzyme binding | IEP | HCCA |
| MF | GO:0031267 | small GTPase binding | IEP | HCCA |
| MF | GO:0032561 | guanyl ribonucleotide binding | IEP | HCCA |
| MF | GO:0036094 | small molecule binding | IEP | HCCA |
| MF | GO:0050661 | NADP binding | IEP | HCCA |
| MF | GO:0051020 | GTPase binding | IEP | HCCA |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR007705 | Vesicle_trsprt_v-SNARE_N | 12 | 90 |
| No external refs found! |
