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  5. Dac_g04286

Dac_g04286


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dac_g04286
Cluster HCCA: Cluster_116

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00243230 evm_27.TU.AmTr_v1... Putative pentatricopeptide repeat-containing protein... 0.04 OrthoFinder output from all 47 species
AMTR_s00098p00167700 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At5g50390,... 0.04 OrthoFinder output from all 47 species
Aev_g42177 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g19186 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g19274 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g28608 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g31716 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g40645 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene28051.t1 Aspi01Gene28051 cofactor of plastid-encoded RNA polymerase *(TAC9) &... 0.02 OrthoFinder output from all 47 species
Azfi_s0048.g030525 No alias not classified & original description: CDS=1-2520 0.05 OrthoFinder output from all 47 species
Azfi_s0219.g058621 No alias not classified & original description: CDS=1-3672 0.06 OrthoFinder output from all 47 species
Dac_g08183 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g18410 VAC1, ECB2, ATECB2 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g07698 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dde_g07340 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g35725 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g48258 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g20812 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01003804001 CRR22 Pentatricopeptide repeat-containing protein At5g16860... 0.04 OrthoFinder output from all 47 species
GSVIVT01024912001 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.04 OrthoFinder output from all 47 species
GSVIVT01033304001 CRR28 Pentatricopeptide repeat-containing protein At2g02980,... 0.04 OrthoFinder output from all 47 species
GSVIVT01035491001 No alias Pentatricopeptide repeat-containing protein At4g33170... 0.05 OrthoFinder output from all 47 species
LOC_Os03g04390.1 LOC_Os03g04390 Pentatricopeptide repeat-containing protein At4g35130,... 0.03 OrthoFinder output from all 47 species
LOC_Os08g06490.2 SLO1, LOC_Os08g06490 Pentatricopeptide repeat-containing protein At4g22760... 0.05 OrthoFinder output from all 47 species
Len_g09547 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g21323 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Lfl_g05656 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g05729 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g11975 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10338179g0010 OTP84 Pentatricopeptide repeat-containing protein At3g57430,... 0.06 OrthoFinder output from all 47 species
MA_10429069g0010 CRR22 Pentatricopeptide repeat-containing protein DOT4,... 0.04 OrthoFinder output from all 47 species
MA_137736g0010 REME1 Pentatricopeptide repeat-containing protein At4g02750... 0.05 OrthoFinder output from all 47 species
Msp_g45075 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g01886 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g05196 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g09573 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g09944 MEF22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g12551 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g35704 PTAC9, OSB2 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g40238 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g43235 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g57723 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g16066 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g19790 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Smo116559 No alias Pentatricopeptide repeat-containing protein At3g09040,... 0.06 OrthoFinder output from all 47 species
Solyc01g081020.1.1 Solyc01g081020 RNA editing factor (OTP80) 0.06 OrthoFinder output from all 47 species
Solyc01g081290.4.1 Solyc01g081290 protein kinase (PEPRK) 0.03 OrthoFinder output from all 47 species
Solyc01g100340.4.1 Solyc01g100340 Pentatricopeptide repeat-containing protein At1g09190... 0.03 OrthoFinder output from all 47 species
Zm00001e003605_P001 DOT4, Zm00001e003605 Pentatricopeptide repeat-containing protein DOT4,... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 715 763
IPR002885 Pentatricopeptide_repeat 377 423
IPR002885 Pentatricopeptide_repeat 176 222
IPR002885 Pentatricopeptide_repeat 277 324
IPR002885 Pentatricopeptide_repeat 74 121
IPR002885 Pentatricopeptide_repeat 819 865
IPR002885 Pentatricopeptide_repeat 481 509
IPR002885 Pentatricopeptide_repeat 793 813
IPR002885 Pentatricopeptide_repeat 49 71
IPR002885 Pentatricopeptide_repeat 453 478
IPR002885 Pentatricopeptide_repeat 554 577
IPR002885 Pentatricopeptide_repeat 582 612
IPR002885 Pentatricopeptide_repeat 352 374
IPR002885 Pentatricopeptide_repeat 895 917
IPR002885 Pentatricopeptide_repeat 655 681
IPR002885 Pentatricopeptide_repeat 683 713
No external refs found!