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  5. Dac_g04507

Dac_g04507


Description : component *(eL19) of large ribosomal-subunit (LSU) proteome & original description: none


Gene families : OG0001435 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001435_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dac_g04507

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00091p00066640 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.02 OrthoFinder output from all 47 species
AT1G02780 emb2386 Ribosomal protein L19e family protein 0.06 OrthoFinder output from all 47 species
Als_g06897 No alias component *(eL19) of large ribosomal-subunit (LSU)... 0.05 OrthoFinder output from all 47 species
Als_g56677 No alias component *(eL19) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Aop_g14682 No alias component *(eL19) of large ribosomal-subunit (LSU)... 0.05 OrthoFinder output from all 47 species
Azfi_s0006.g009570 No alias component *(eL19) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Cba_g07141 No alias component *(eL19) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Ceric.17G056200.1 Ceric.17G056200 component *(eL19) of large ribosomal-subunit (LSU)... 0.05 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021181.1 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.05 OrthoFinder output from all 47 species
GSVIVT01035096001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.05 OrthoFinder output from all 47 species
Gb_23171 emb2386 component RPL19 of LSU proteome component 0.06 OrthoFinder output from all 47 species
LOC_Os03g21940.1 emb2386, LOC_Os03g21940 component RPL19 of LSU proteome component 0.04 OrthoFinder output from all 47 species
LOC_Os03g38260.1 LOC_Os03g38260 component RPL19 of LSU proteome component 0.04 OrthoFinder output from all 47 species
MA_1839g0010 emb2386 component RPL19 of LSU proteome component 0.05 OrthoFinder output from all 47 species
MA_22977g0010 emb2386 component RPL19 of LSU proteome component 0.05 OrthoFinder output from all 47 species
Mp7g09050.1 No alias component RPL19 of LSU proteome component 0.04 OrthoFinder output from all 47 species
Pp3c15_5130V3.1 Pp3c15_5130 Ribosomal protein L19e family protein 0.01 OrthoFinder output from all 47 species
Pp3c16_410V3.1 Pp3c16_410 Ribosomal protein L19e family protein 0.05 OrthoFinder output from all 47 species
Pp3c21_11230V3.1 Pp3c21_11230 Ribosomal protein L19e family protein 0.04 OrthoFinder output from all 47 species
Pp3c9_14720V3.1 Pp3c9_14720 Ribosomal protein L19e family protein 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0011.g005282 No alias component *(eL19) of large ribosomal-subunit (LSU)... 0.05 OrthoFinder output from all 47 species
Sam_g25834 No alias component *(eL19) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Smo179747 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.06 OrthoFinder output from all 47 species
Smo271656 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.03 OrthoFinder output from all 47 species
Spa_g11535 No alias component *(eL19) of large ribosomal-subunit (LSU)... 0.05 OrthoFinder output from all 47 species
Spa_g11536 No alias component *(eL19) of large ribosomal-subunit (LSU)... 0.06 OrthoFinder output from all 47 species
Tin_g03158 No alias component *(eL19) of large ribosomal-subunit (LSU)... 0.07 OrthoFinder output from all 47 species
Zm00001e020524_P001 emb2386, Zm00001e020524 component RPL19 of LSU proteome component 0.05 OrthoFinder output from all 47 species
Zm00001e025202_P001 Zm00001e025202 component RPL19 of LSU proteome component 0.04 OrthoFinder output from all 47 species
Zm00001e036280_P001 Zm00001e036280 component RPL19 of LSU proteome component 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003712 transcription coregulator activity IEP HCCA
BP GO:0006357 regulation of transcription by RNA polymerase II IEP HCCA
CC GO:0008250 oligosaccharyltransferase complex IEP HCCA
CC GO:0016592 mediator complex IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR000196 Ribosomal_L19/L19e 4 145
No external refs found!