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  5. Dac_g04628

Dac_g04628


Description : substrate adaptor *(ARKP1) of SCF E3 ubiquitin ligase complex & original description: none


Gene families : OG0000497 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000497_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dac_g04628
Cluster HCCA: Cluster_83

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00013p00223970 evm_27.TU.AmTr_v1... F-box/kelch-repeat protein At3g27150 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AT1G26930 No alias Galactose oxidase/kelch repeat superfamily protein 0.03 OrthoFinder output from all 47 species
AT5G40680 No alias Galactose oxidase/kelch repeat superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g017957 No alias substrate adaptor *(ARKP1) of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Aev_g17220 No alias substrate adaptor *(ARKP1) of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Als_g18445 No alias substrate adaptor *(ARKP1) of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Aob_g04321 No alias substrate adaptor *(ARKP1) of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Azfi_s0021.g015684 No alias substrate adaptor *(ARKP1) of SCF E3 ubiquitin ligase... 0.04 OrthoFinder output from all 47 species
Dcu_g04688 No alias substrate adaptor *(ARKP1) of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Dcu_g49601 No alias substrate adaptor *(ARKP1) of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Ehy_g06805 No alias substrate adaptor *(ARKP1) of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Ehy_g10672 No alias substrate adaptor *(ARKP1) of SCF E3 ubiquitin ligase... 0.04 OrthoFinder output from all 47 species
Ehy_g27110 No alias substrate adaptor *(ARKP1) of SCF E3 ubiquitin ligase... 0.04 OrthoFinder output from all 47 species
LOC_Os04g52830.1 LOC_Os04g52830 F-box/kelch-repeat protein At5g60570 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
MA_98603g0010 No alias F-box/kelch-repeat protein At3g27150 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Mp4g10310.1 No alias F-box/kelch-repeat protein SKIP11 OS=Arabidopsis... 0.01 OrthoFinder output from all 47 species
Msp_g06746 No alias substrate adaptor *(ARKP1) of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Ppi_g09023 No alias substrate adaptor *(ARKP1) of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Zm00001e021211_P001 Zm00001e021211 F-box/kelch-repeat protein At1g26930 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Zm00001e023895_P005 Zm00001e023895 F-box/kelch-repeat protein At1g74510 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Zm00001e038898_P001 Zm00001e038898 F-box/kelch-repeat protein SKIP11 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004857 enzyme inhibitor activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP HCCA
MF GO:0140678 molecular function inhibitor activity IEP HCCA
InterPro domains Description Start Stop
IPR006652 Kelch_1 232 277
IPR006652 Kelch_1 281 325
No external refs found!