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  5. Dac_g05152

Dac_g05152


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dac_g05152

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00008p00232800 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At4g32430,... 0.03 OrthoFinder output from all 47 species
Adi_g036585 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g18166 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g21001 OSB1 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g37659 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g13601 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g06622 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g07982 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g19954 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g20191 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aop_g28706 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g38453 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g69416 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Azfi_s0002.g001613 PTAC9, OSB2 ssDNA-binding protein *(OSB) & original description: CDS=195-1385 0.02 OrthoFinder output from all 47 species
Azfi_s0040.g026593 CRR22 not classified & original description: CDS=1-1842 0.03 OrthoFinder output from all 47 species
Azfi_s0068.g036354 CRR22 not classified & original description: CDS=140-2386 0.04 OrthoFinder output from all 47 species
Cba_g05956 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ceric.07G067300.1 Ceric.07G067300 not classified & original description: pacid=50625994... 0.05 OrthoFinder output from all 47 species
Ceric.15G015100.1 CRR22, Ceric.15G015100 not classified & original description: pacid=50640379... 0.03 OrthoFinder output from all 47 species
Ceric.30G007900.1 Ceric.30G007900 not classified & original description: pacid=50608292... 0.02 OrthoFinder output from all 47 species
Ceric.39G011500.1 Ceric.39G011500 not classified & original description: pacid=50582697... 0.03 OrthoFinder output from all 47 species
Ceric.39G022100.1 Ceric.39G022100 not classified & original description: pacid=50582510... 0.07 OrthoFinder output from all 47 species
Dcu_g07693 CRR22 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g07723 CRR22 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g40955 VAC1, ECB2, ATECB2 ssDNA-binding protein *(OSB) & original description: none 0.06 OrthoFinder output from all 47 species
Dde_g15843 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01008407001 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.06 OrthoFinder output from all 47 species
GSVIVT01028747001 No alias Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
GSVIVT01033004001 No alias Pentatricopeptide repeat-containing protein At3g26782,... 0.05 OrthoFinder output from all 47 species
Gb_23018 REME1 RNA editing factor (OTP82) 0.06 OrthoFinder output from all 47 species
Gb_30147 No alias Pentatricopeptide repeat-containing protein At3g12770... 0.05 OrthoFinder output from all 47 species
Gb_38248 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.04 OrthoFinder output from all 47 species
LOC_Os04g58980.1 LOC_Os04g58980 Putative pentatricopeptide repeat-containing protein... 0.04 OrthoFinder output from all 47 species
Len_g34094 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
MA_10429069g0010 CRR22 Pentatricopeptide repeat-containing protein DOT4,... 0.04 OrthoFinder output from all 47 species
MA_615077g0010 No alias Pentatricopeptide repeat-containing protein At3g12770... 0.04 OrthoFinder output from all 47 species
Msp_g12042 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g15926 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g17454 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g17708 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g40961 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g46086 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g48594 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g48905 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g13996 OTP86 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g22722 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g32189 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g38648 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g04611 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g62422 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc01g006920.4.1 Solyc01g006920 Pentatricopeptide repeat-containing protein At4g39530... 0.03 OrthoFinder output from all 47 species
Solyc01g081560.2.1 Solyc01g081560 Pentatricopeptide repeat-containing protein At4g13650... 0.03 OrthoFinder output from all 47 species
Solyc01g090510.2.1 Solyc01g090510 Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
Solyc01g098480.3.1 Solyc01g098480 Pentatricopeptide repeat-containing protein At2g21090... 0.03 OrthoFinder output from all 47 species
Solyc01g099000.1.1 Solyc01g099000 Pentatricopeptide repeat-containing protein At3g05340... 0.05 OrthoFinder output from all 47 species
Solyc01g110010.3.1 Solyc01g110010 Pentatricopeptide repeat-containing protein At1g74600,... 0.03 OrthoFinder output from all 47 species
Solyc02g082160.2.1 CRR22, Solyc02g082160 Pentatricopeptide repeat-containing protein At1g11290,... 0.03 OrthoFinder output from all 47 species
Solyc03g093630.3.1 CRR2, Solyc03g093630 Pentatricopeptide repeat-containing protein At2g27610... 0.03 OrthoFinder output from all 47 species
Solyc04g074160.3.1 Solyc04g074160 Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
Solyc04g076330.3.1 CRR22, Solyc04g076330 Pentatricopeptide repeat-containing protein At2g29760,... 0.03 OrthoFinder output from all 47 species
Solyc05g009400.3.1 Solyc05g009400 Pentatricopeptide repeat-containing protein At3g29230... 0.03 OrthoFinder output from all 47 species
Solyc05g012630.2.1 Solyc05g012630 Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
Solyc05g046280.3.1 Solyc05g046280 RNA editing factor (MEF13) 0.03 OrthoFinder output from all 47 species
Solyc06g048900.1.1 Solyc06g048900 Pentatricopeptide repeat-containing protein At2g40720... 0.03 OrthoFinder output from all 47 species
Solyc06g064600.1.1 Solyc06g064600 Pentatricopeptide repeat-containing protein At1g56690,... 0.05 OrthoFinder output from all 47 species
Solyc06g082880.2.1 Solyc06g082880 RNA editing factor (MEF13) 0.03 OrthoFinder output from all 47 species
Solyc09g065710.1.1 OTP86, Solyc09g065710 RNA editing factor (OTP86) 0.03 OrthoFinder output from all 47 species
Solyc11g006940.3.1 Solyc11g006940 component Sm-G of U1/U2/U4/U5-associated Sm accessory... 0.03 OrthoFinder output from all 47 species
Solyc11g008970.1.1 Solyc11g008970 Pentatricopeptide repeat-containing protein At4g39952,... 0.03 OrthoFinder output from all 47 species
Solyc11g067210.1.1 Solyc11g067210 Pentatricopeptide repeat-containing protein At2g27610... 0.03 OrthoFinder output from all 47 species
Spa_g14170 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g55591 CRR2 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Tin_g06435 REME1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g26528 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Tin_g30136 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e023800_P003 PDE247, CLB19,... RNA editing factor (CLB19) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 680 727
IPR002885 Pentatricopeptide_repeat 176 216
IPR002885 Pentatricopeptide_repeat 921 966
IPR002885 Pentatricopeptide_repeat 479 525
IPR002885 Pentatricopeptide_repeat 820 863
IPR002885 Pentatricopeptide_repeat 583 612
IPR002885 Pentatricopeptide_repeat 251 276
IPR002885 Pentatricopeptide_repeat 894 918
IPR002885 Pentatricopeptide_repeat 784 814
IPR002885 Pentatricopeptide_repeat 996 1018
IPR002885 Pentatricopeptide_repeat 381 410
IPR002885 Pentatricopeptide_repeat 554 579
IPR002885 Pentatricopeptide_repeat 150 172
IPR002885 Pentatricopeptide_repeat 756 779
IPR002885 Pentatricopeptide_repeat 279 308
IPR046848 E_motif 1038 1099
IPR002885 Pentatricopeptide_repeat 78 121
IPR032867 DYW_dom 1146 1189
No external refs found!