Description : mRNA-binding adaptor ALY/Tho4 of TREX/THO mRNP trafficking complex & original description: none
Gene families : OG0000667 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000667_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT5G59950 | No alias | RNA-binding (RRM/RBD/RNP motifs) family protein | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g07392 | No alias | mRNA-binding adaptor ALY/Tho4 of TREX/THO mRNP... | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g76956 | No alias | mRNA-binding adaptor ALY/Tho4 of TREX/THO mRNP... | 0.03 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00000194.40 | No alias | RNA processing.messenger ribonucleoprotein particle... | 0.01 | OrthoFinder output from all 47 species | |
| Lfl_g02048 | No alias | mRNA-binding adaptor ALY/Tho4 of TREX/THO mRNP... | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g10108 | No alias | mRNA-binding adaptor ALY/Tho4 of TREX/THO mRNP... | 0.02 | OrthoFinder output from all 47 species | |
| Pnu_g16813 | No alias | mRNA-binding adaptor ALY/Tho4 of TREX/THO mRNP... | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g06668 | No alias | mRNA-binding adaptor ALY/Tho4 of TREX/THO mRNP... | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g32971 | No alias | mRNA-binding adaptor ALY/Tho4 of TREX/THO mRNP... | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g48089 | No alias | mRNA-binding adaptor ALY/Tho4 of TREX/THO mRNP... | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003723 | RNA binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000295 | adenine nucleotide transmembrane transporter activity | IEP | HCCA |
| MF | GO:0003743 | translation initiation factor activity | IEP | HCCA |
| MF | GO:0004408 | holocytochrome-c synthase activity | IEP | HCCA |
| MF | GO:0005346 | purine ribonucleotide transmembrane transporter activity | IEP | HCCA |
| MF | GO:0005347 | ATP transmembrane transporter activity | IEP | HCCA |
| MF | GO:0005471 | ATP:ADP antiporter activity | IEP | HCCA |
| CC | GO:0005739 | mitochondrion | IEP | HCCA |
| BP | GO:0006351 | DNA-templated transcription | IEP | HCCA |
| BP | GO:0006862 | nucleotide transport | IEP | HCCA |
| MF | GO:0008135 | translation factor activity, RNA binding | IEP | HCCA |
| MF | GO:0008514 | organic anion transmembrane transporter activity | IEP | HCCA |
| MF | GO:0015215 | nucleotide transmembrane transporter activity | IEP | HCCA |
| MF | GO:0015216 | purine nucleotide transmembrane transporter activity | IEP | HCCA |
| MF | GO:0015217 | ADP transmembrane transporter activity | IEP | HCCA |
| MF | GO:0015291 | secondary active transmembrane transporter activity | IEP | HCCA |
| MF | GO:0015297 | antiporter activity | IEP | HCCA |
| MF | GO:0015605 | organophosphate ester transmembrane transporter activity | IEP | HCCA |
| BP | GO:0015748 | organophosphate ester transport | IEP | HCCA |
| BP | GO:0015931 | nucleobase-containing compound transport | IEP | HCCA |
| MF | GO:0015932 | nucleobase-containing compound transmembrane transporter activity | IEP | HCCA |
| MF | GO:0016846 | carbon-sulfur lyase activity | IEP | HCCA |
| MF | GO:0045182 | translation regulator activity | IEP | HCCA |
| MF | GO:0090079 | translation regulator activity, nucleic acid binding | IEP | HCCA |
| BP | GO:0097659 | nucleic acid-templated transcription | IEP | HCCA |
| MF | GO:1901505 | carbohydrate derivative transmembrane transporter activity | IEP | HCCA |
| No external refs found! |
