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  5. Dac_g09258

Dac_g09258


Description : not classified & original description: none


Gene families : OG0000563 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000563_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dac_g09258
Cluster HCCA: Cluster_117

Target Alias Description ECC score Gene Family Method Actions
Adi_g007707 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g107987 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06086 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g34174 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.12G043400.1 Ceric.12G043400 not classified & original description: pacid=50601666... 0.04 OrthoFinder output from all 47 species
Ceric.23G036900.1 Ceric.23G036900 not classified & original description: pacid=50610458... 0.02 OrthoFinder output from all 47 species
Cre07.g352650 No alias No description available 0.02 OrthoFinder output from all 47 species
Cre12.g549100 No alias No description available 0.02 OrthoFinder output from all 47 species
Dcu_g32908 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g01620 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g12794 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Pir_g08768 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63363 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pp3c7_8760V3.1 Pp3c7_8760 RNA-binding (RRM/RBD/RNP motifs) family protein 0.01 OrthoFinder output from all 47 species
Ppi_g14319 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g37444 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g38344 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Smo413714 No alias No description available 0.01 OrthoFinder output from all 47 species
Solyc02g038816.1.1 Solyc02g038816 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Spa_g08908 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g25573 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g54015 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g10520 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g27795 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000428 DNA-directed RNA polymerase complex IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004176 ATP-dependent peptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005666 RNA polymerase III complex IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006383 transcription by RNA polymerase III IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
CC GO:0030880 RNA polymerase complex IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0042393 histone binding IEP HCCA
CC GO:0055029 nuclear DNA-directed RNA polymerase complex IEP HCCA
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 288 352
IPR000504 RRM_dom 405 471
No external refs found!