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  5. Dac_g10163

Dac_g10163


Description : methylation reader *(MBD5-6) & original description: none


Gene families : OG0000559 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000559_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dac_g10163

Target Alias Description ECC score Gene Family Method Actions
Als_g11443 ATMBD6, MBD6 methylation reader *(MBD5-6) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g15671 No alias methylation reader *(MBD5-6) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g26743 MBD05, MBD5, ATMBD5 methylation reader *(MBD5-6) & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene15846.t1 Aspi01Gene15846 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene62285.t1 ATMBD6, MBD6,... methylation reader *(MBD5-6) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0158.g053875 MBD05, MBD5, ATMBD5 methylation reader *(MBD5-6) & original description: CDS=259-3537 0.02 OrthoFinder output from all 47 species
Cba_g04582 MBD05, MBD5, ATMBD5 methylation reader *(MBD5-6) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g61579 MBD05, MBD5, ATMBD5 methylation reader *(MBD5-6) & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g09713 MBD05, MBD5, ATMBD5 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g07073 MBD05, MBD5, ATMBD5 methylation reader *(MBD5-6) & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g25548 MBD05, MBD5, ATMBD5 methylation reader *(MBD5-6) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g06705 MBD05, MBD5, ATMBD5 methylation reader *(MBD5-6) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g01975 MBD05, MBD5, ATMBD5 methylation reader *(MBD5-6) & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g37242 No alias methylation reader *(MBD5-6) & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g05822 MBD05, MBD5, ATMBD5 methylation reader *(MBD5-6) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g35269 No alias methylation reader *(MBD5-6) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g50687 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g02100 No alias methylation reader *(MBD5-6) & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEP HCCA
MF GO:0008134 transcription factor binding IEP HCCA
MF GO:0017025 TBP-class protein binding IEP HCCA
MF GO:0140296 general transcription initiation factor binding IEP HCCA
InterPro domains Description Start Stop
IPR001739 Methyl_CpG_DNA-bd 335 391
No external refs found!