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  5. Dac_g11528

Dac_g11528


Description : E3 ubiquitin ligase & original description: none


Gene families : OG0000484 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000484_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dac_g11528

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00023p00139440 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AT2G37950 No alias RING/FYVE/PHD zinc finger superfamily protein 0.01 OrthoFinder output from all 47 species
AT3G09760 No alias RING/U-box superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g011811 No alias E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.15G009300.1 Ceric.15G009300 E3 ubiquitin ligase & original description:... 0.03 OrthoFinder output from all 47 species
Ehy_g04869 No alias E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Gb_20192 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os06g23274.1 LOC_Os06g23274 RING-v-class E3 ligase 0.01 OrthoFinder output from all 47 species
Nbi_g00704 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g43716 No alias E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g33898 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g12741 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0096.g019306 No alias E3 ubiquitin ligase & original description: CDS=24-614 0.02 OrthoFinder output from all 47 species
Spa_g15096 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g02444 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004601 peroxidase activity IEP HCCA
MF GO:0004645 1,4-alpha-oligoglucan phosphorylase activity IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
MF GO:0008184 glycogen phosphorylase activity IEP HCCA
MF GO:0008199 ferric iron binding IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
MF GO:0051920 peroxiredoxin activity IEP HCCA
InterPro domains Description Start Stop
IPR011016 Znf_RING-CH 138 185
No external refs found!