Aliases : CRR22
Description : not classified & original description: none
Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00003p00263110 | No alias | Pentatricopeptide repeat-containing protein At1g03540... | 0.03 | OrthoFinder output from all 47 species | |
| AT1G03540 | No alias | Pentatricopeptide repeat (PPR-like) superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
| AT2G03380 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
| AT3G28660 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
| AT4G32430 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| AT5G06540 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g005586 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g007371 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g020363 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g083433 | EMB2261 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g32627 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g12481 | OTP82 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g17653 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g36514 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g38435 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g05074 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g06720 | OTP82 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g06995 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g07213 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g19283 | CRR2 | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g30585 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g32754 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g33246 | EMB2758 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g27296 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g27582 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g27846 | REME1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g36878 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g37108 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g37552 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g37575 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g03709 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g17445 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g26042 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g28699 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g33579 | REME1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g51258 | CRR2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g68030 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g68127 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene34104.t1 | OTP84, Aspi01Gene34104 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene55960.t1 | SLO1, Aspi01Gene55960 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0001.g000887 | No alias | not classified & original description: CDS=1-1611 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0022.g016137 | No alias | not classified & original description: CDS=1-1566 | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0027.g023505 | No alias | not classified & original description: CDS=32-2620 | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0062.g035166 | No alias | not classified & original description: CDS=1-3372 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0303.g063761 | No alias | not classified & original description: CDS=81-2876 | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0326.g065222 | No alias | not classified & original description: CDS=1-2895 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0380.g067373 | No alias | not classified & original description: CDS=1-3669 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0619.g079560 | EMB2758 | not classified & original description: CDS=1-2046 | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g04081 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g06574 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Cba_g07412 | OTP84 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g07743 | OTP86 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g07779 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g11842 | OTP84 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g16282 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g19060 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g19898 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g20154 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g20506 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g20779 | EMB2758 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g20886 | OTP84 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g25491 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g29859 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g30018 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g31665 | EMB2758 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g34636 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g34641 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g34765 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g38987 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g45888 | CRR2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g46044 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g67649 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g67769 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g71783 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g76301 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.04G112800.1 | Ceric.04G112800 | not classified & original description: pacid=50632583... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.09G007000.1 | Ceric.09G007000 | not classified & original description: pacid=50586983... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.10G014900.1 | Ceric.10G014900 | not classified & original description: pacid=50613343... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.10G025700.1 | VAC1, ECB2,... | not classified & original description: pacid=50613326... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.18G049100.1 | Ceric.18G049100 | not classified & original description: pacid=50621467... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.18G069700.1 | CRR2, Ceric.18G069700 | not classified & original description: pacid=50622363... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.31G002400.1 | Ceric.31G002400 | not classified & original description: pacid=50574432... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.37G044800.1 | Ceric.37G044800 | not classified & original description: pacid=50617007... | 0.04 | OrthoFinder output from all 47 species | |
| Cre12.g483700 | OSB4 | Cell cycle.organelle machineries.DNA... | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g26858 | OTP84 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g43173 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g47941 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g50144 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g50838 | CRR2 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dde_g04440 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g05349 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g06719 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g15900 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g21648 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dde_g22168 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g22314 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dde_g26347 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g15341 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g16109 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ehy_g26396 | OTP84 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01010031001 | No alias | RNA processing.organelle machineries.RNA... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01011333001 | SLO1 | Pentatricopeptide repeat-containing protein At1g08070,... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01029382001 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01036975001 | EMB2758 | Pentatricopeptide repeat-containing protein At4g33990... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01037377001 | OTP82 | Pentatricopeptide repeat-containing protein At1g08070,... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_00776 | No alias | Pentatricopeptide repeat-containing protein At5g50390,... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_18015 | No alias | Pentatricopeptide repeat-containing protein At4g33170... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_21443 | OTP86 | Pentatricopeptide repeat-containing protein At3g63370,... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_33693 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os01g11470.1 | LOC_Os01g11470 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os03g38580.1 | EMB2261, LOC_Os03g38580 | Pentatricopeptide repeat-containing protein At3g24000,... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os07g39090.1 | LOC_Os07g39090 | Putative pentatricopeptide repeat-containing protein... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os09g07780.1 | OTP84, LOC_Os09g07780 | Pentatricopeptide repeat-containing protein At3g57430,... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os11g29230.1 | CRR22, LOC_Os11g29230 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.03 | OrthoFinder output from all 47 species | |
| Len_g03387 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g04361 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Len_g09270 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g17962 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g18579 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g18585 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Len_g19000 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g19030 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g21362 | OTP86 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g40999 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Len_g54484 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g06094 | EMB2758 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g07409 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g11894 | OTP86 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g15171 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| MA_10426444g0010 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.02 | OrthoFinder output from all 47 species | |
| MA_135075g0020 | OTP84 | Pentatricopeptide repeat-containing protein At3g57430,... | 0.03 | OrthoFinder output from all 47 species | |
| MA_7907g0020 | OTP84 | Pentatricopeptide repeat-containing protein At3g57430,... | 0.02 | OrthoFinder output from all 47 species | |
| MA_8893194g0010 | MEF1 | RNA editing factor (MEF1) | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g04519 | OTP86 | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g34245 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g46446 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g15562 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g20228 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g23872 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g09916 | CRR2 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g19382 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g19660 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g12604 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g13553 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g14507 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g30413 | OTP84 | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g31332 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g49579 | OTP84 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g57347 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g63511 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g23569 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g06806 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g09510 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g36021 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g53363 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g53959 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g53966 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g56822 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0051.g013907 | No alias | not classified & original description: CDS=1-1875 | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0068.g016434 | No alias | not classified & original description: CDS=1-1746 | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0092.g018953 | No alias | not classified & original description: CDS=533-943 | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0321.g027231 | No alias | substrate adaptor of SCF E3 ubiquitin ligase complex &... | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g27561 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Smo92456 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc03g051780.3.1 | Solyc03g051780 | Putative pentatricopeptide repeat-containing protein... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc04g016540.2.1 | Solyc04g016540 | Pentatricopeptide repeat-containing protein At2g39620... | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g00965 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g09284 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g11331 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g21942 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g47727 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g06127 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g06522 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e005246_P001 | Zm00001e005246 | Pentatricopeptide repeat-containing protein At2g41080... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e022858_P001 | Zm00001e022858 | Pentatricopeptide repeat-containing protein At3g57430,... | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0006396 | RNA processing | IEP | HCCA |
| BP | GO:0006397 | mRNA processing | IEP | HCCA |
| BP | GO:0016071 | mRNA metabolic process | IEP | HCCA |
| BP | GO:0031123 | RNA 3'-end processing | IEP | HCCA |
| BP | GO:0031124 | mRNA 3'-end processing | IEP | HCCA |
| MF | GO:0050660 | flavin adenine dinucleotide binding | IEP | HCCA |
| MF | GO:0071949 | FAD binding | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 279 | 327 |
| IPR002885 | Pentatricopeptide_repeat | 175 | 226 |
| IPR002885 | Pentatricopeptide_repeat | 77 | 98 |
| IPR002885 | Pentatricopeptide_repeat | 253 | 278 |
| IPR002885 | Pentatricopeptide_repeat | 453 | 477 |
| IPR002885 | Pentatricopeptide_repeat | 47 | 75 |
| IPR002885 | Pentatricopeptide_repeat | 382 | 408 |
| No external refs found! |
