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  5. Dac_g13479

Dac_g13479


Description : RING-H2-class BTL-subclass E3 ubiquitin ligase & original description: none


Gene families : OG0000101 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000101_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dac_g13479
Cluster HCCA: Cluster_22

Target Alias Description ECC score Gene Family Method Actions
AT1G14200 No alias RING/U-box superfamily protein 0.07 OrthoFinder output from all 47 species
AT1G26800 No alias RING/U-box superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g085324 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Dcu_g05540 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
LOC_Os07g43740.1 LOC_Os07g43740 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Ppi_g00999 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g24681 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Solyc05g007895.1.1 Solyc05g007895 E3 ubiquitin-protein ligase MPSR1 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Solyc08g075910.1.1 RHC1A, Solyc08g075910 Probable E3 ubiquitin-protein ligase RHC1A... 0.03 OrthoFinder output from all 47 species
Tin_g00982 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Zm00001e010857_P001 Zm00001e010857 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006629 lipid metabolic process IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
InterPro domains Description Start Stop
IPR001841 Znf_RING 296 338
No external refs found!