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  5. Dac_g14654

Dac_g14654 (LOP1, TRN1)


Aliases : LOP1, TRN1

Description : not classified & original description: none


Gene families : OG0000350 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000350_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dac_g14654
Cluster HCCA: Cluster_47

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00055p00138540 LOP1, TRN1,... Protein TORNADO 1 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
Aev_g39267 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g00814 LOP1, TRN1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g36996 LOP1, TRN1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.18G016000.1 Ceric.18G016000 not classified & original description: pacid=50622446... 0.04 OrthoFinder output from all 47 species
Ceric.18G016400.1 Ceric.18G016400 not classified & original description: pacid=50620952... 0.03 OrthoFinder output from all 47 species
Ceric.20G043500.1 LOP1, TRN1,... not classified & original description: pacid=50566189... 0.04 OrthoFinder output from all 47 species
Dac_g20580 LOP1, TRN1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g21708 LOP1, TRN1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g40231 LOP1, TRN1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g19742 LOP1, TRN1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g10112 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g10113 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g17501 LOP1, TRN1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g25087 LOP1, TRN1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g36086 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g39802 LOP1, TRN1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g20985 LOP1, TRN1 not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0070569 uridylyltransferase activity IEP HCCA
InterPro domains Description Start Stop
IPR032171 COR 609 786
No external refs found!