Dac_g16813 (PGP16)

Aliases : PGP16

Description : not classified & original description: none

Gene families : OG0000048 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Dac_g16813

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00045p00109790	PGP11,...	No description available	0.03	OrthoFinder output from all 47 species
AMTR_s00090p00165440	evm_27.TU.AmTr_v1...	Solute transport.primary active transport.ABC...	0.02	OrthoFinder output from all 47 species
AT1G27940	PGP13	P-glycoprotein 13	0.02	OrthoFinder output from all 47 species
AT3G28345	No alias	ABC transporter family protein	0.03	OrthoFinder output from all 47 species
AT3G28415	No alias	ABC transporter family protein	0.02	OrthoFinder output from all 47 species
Als_g07510	PGP11	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Als_g28385	PGP1, ABCB1, ATPGP1	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Dde_g30303	PGP2	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01006613001	No alias	No description available	0.02	OrthoFinder output from all 47 species
Gb_02468	No alias	subfamily ABCB transporter	0.02	OrthoFinder output from all 47 species
Gb_10216	No alias	subfamily ABCB transporter	0.03	OrthoFinder output from all 47 species
MA_18863g0020	PGP3, MDR3	ABC transporter B family member 3 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
Ore_g22891	PGP13	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ppi_g17653	PGP1, ABCB1, ATPGP1	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Sam_g27139	No alias	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Solyc02g087410.4.1	Solyc02g087410	subfamily ABCB transporter	0.02	OrthoFinder output from all 47 species
Zm00001e025438_P001	PGP21, Zm00001e025438	subfamily ABCB transporter	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0015399	primary active transmembrane transporter activity	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0022804	active transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0042626	ATPase-coupled transmembrane transporter activity	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140359	ABC-type transporter activity	IEA	Interproscan
MF	GO:0140657	ATP-dependent activity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0015267	channel activity	IEP	HCCA
MF	GO:0015299	obsolete solute:proton antiporter activity	IEP	HCCA
MF	GO:0022803	passive transmembrane transporter activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR011527	ABC1_TM_dom	7	158

External Links

No external refs found!

Dac_g16813 (PGP16)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation