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  5. Dac_g16825

Dac_g16825


Description : pectin methylesterase & original description: none


Gene families : OG0000083 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000083_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dac_g16825
Cluster HCCA: Cluster_156

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00106p00092510 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.02 OrthoFinder output from all 47 species
AT1G05310 No alias Pectin lyase-like superfamily protein 0.04 OrthoFinder output from all 47 species
Adi_g003309 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g10289 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g16363 No alias pectin methylesterase & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g18114 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g20368 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g39532 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g40489 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Als_g08007 No alias pectin methylesterase & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g11400 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g14509 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g01243 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g25292 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g69965 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene07316.t2 VGDH1, Aspi01Gene07316 pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene30602.t1 Aspi01Gene30602 pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene31942.t1 Aspi01Gene31942 pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene33566.t1 Aspi01Gene33566 pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene59355.t1 Aspi01Gene59355 pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0103.g044651 No alias pectin methylesterase & original description: CDS=1-1083 0.04 OrthoFinder output from all 47 species
Ceric.10G072300.1 Ceric.10G072300 pectin methylesterase & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.19G035800.1 Ceric.19G035800 pectin methylesterase & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.29G054600.1 Ceric.29G054600 pectin methylesterase & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.37G019400.1 Ceric.37G019400 pectin methylesterase & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.39G035900.1 Ceric.39G035900 pectin methylesterase & original description:... 0.03 OrthoFinder output from all 47 species
Dac_g20667 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g44261 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g46321 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g31652 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01000525001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.02 OrthoFinder output from all 47 species
GSVIVT01013838001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.03 OrthoFinder output from all 47 species
GSVIVT01015852001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.05 OrthoFinder output from all 47 species
GSVIVT01031250001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.03 OrthoFinder output from all 47 species
LOC_Os01g53990.1 LOC_Os01g53990 pectin methylesterase 0.02 OrthoFinder output from all 47 species
MA_16389g0020 No alias pectin methylesterase 0.03 OrthoFinder output from all 47 species
MA_40503g0010 ATPE11, PE11 pectin methylesterase 0.01 OrthoFinder output from all 47 species
MA_66089g0010 No alias pectin methylesterase 0.02 OrthoFinder output from all 47 species
Mp2g19430.1 No alias pectin methylesterase 0.03 OrthoFinder output from all 47 species
Mp4g01190.1 No alias pectin methylesterase 0.02 OrthoFinder output from all 47 species
Mp5g03920.1 No alias pectin methylesterase 0.02 OrthoFinder output from all 47 species
Mp5g03930.1 No alias pectin methylesterase 0.02 OrthoFinder output from all 47 species
Msp_g44845 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g05557 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g06428 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g27386 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g29702 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g30829 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g39490 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g43955 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g02205 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g28944 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g61465 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g02095 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Solyc12g008530.2.1 Solyc12g008530 pectin methylesterase 0.02 OrthoFinder output from all 47 species
Spa_g07165 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g29524 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e029074_P001 Zm00001e029074 pectin methylesterase 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0030599 pectinesterase activity IEA Interproscan
BP GO:0042545 cell wall modification IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005507 copper ion binding IEP HCCA
BP GO:0006952 defense response IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
InterPro domains Description Start Stop
IPR000070 Pectinesterase_cat 85 374
No external refs found!