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  5. Dac_g16891

Dac_g16891


Description : pectin methylesterase & original description: none


Gene families : OG0000083 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000083_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dac_g16891

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00106p00092510 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.03 OrthoFinder output from all 47 species
AT1G05310 No alias Pectin lyase-like superfamily protein 0.04 OrthoFinder output from all 47 species
AT2G36710 No alias Pectin lyase-like superfamily protein 0.03 OrthoFinder output from all 47 species
Aev_g16363 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g23487 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Als_g08007 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Als_g11060 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g04100 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g21821 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g22635 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g01243 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g14528 No alias pectin methylesterase & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g20106 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene07316.t2 VGDH1, Aspi01Gene07316 pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene10492.t1 Aspi01Gene10492 pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene20189.t1 Aspi01Gene20189 pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene59341.t1 Aspi01Gene59341 pectin methylesterase & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene59347.t1 Aspi01Gene59347 pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene70538.t1 Aspi01Gene70538 pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0016.g014409 No alias pectin methylesterase & original description: CDS=201-1415 0.03 OrthoFinder output from all 47 species
Azfi_s0055.g033955 No alias pectin methylesterase & original description: CDS=387-1493 0.04 OrthoFinder output from all 47 species
Ceric.03G008900.1 Ceric.03G008900 pectin methylesterase & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.05G031400.1 Ceric.05G031400 pectin methylesterase & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.11G006300.1 Ceric.11G006300 pectin methylesterase & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.11G006400.1 Ceric.11G006400 pectin methylesterase & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.11G006500.1 Ceric.11G006500 pectin methylesterase & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.11G007100.1 Ceric.11G007100 pectin methylesterase & original description:... 0.1 OrthoFinder output from all 47 species
Ceric.11G007600.1 Ceric.11G007600 pectin methylesterase & original description:... 0.06 OrthoFinder output from all 47 species
Ceric.11G007800.1 Ceric.11G007800 not classified & original description: pacid=50595757... 0.06 OrthoFinder output from all 47 species
Ceric.11G007900.1 Ceric.11G007900 pectin methylesterase & original description:... 0.06 OrthoFinder output from all 47 species
Ceric.13G037000.1 Ceric.13G037000 pectin methylesterase & original description:... 0.1 OrthoFinder output from all 47 species
Ceric.13G037400.1 Ceric.13G037400 pectin methylesterase & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.13G037800.1 Ceric.13G037800 pectin methylesterase & original description:... 0.1 OrthoFinder output from all 47 species
Ceric.1Z171200.1 Ceric.1Z171200 pectin methylesterase & original description:... 0.07 OrthoFinder output from all 47 species
Ceric.1Z228300.1 Ceric.1Z228300 pectin methylesterase & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.21G056100.1 VGDH1, Ceric.21G056100 not classified & original description: pacid=50603924... 0.03 OrthoFinder output from all 47 species
Ceric.35G046900.1 Ceric.35G046900 pectin methylesterase & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.37G019000.1 Ceric.37G019000 pectin methylesterase & original description:... 0.03 OrthoFinder output from all 47 species
Dac_g00830 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g11820 No alias EC_3.1 hydrolase acting on ester bond & original... 0.03 OrthoFinder output from all 47 species
Dcu_g07472 No alias pectin methylesterase & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g11351 No alias pectin methylesterase & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g14896 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g51244 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g13696 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g38152 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g46321 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g12392 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g12393 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g13030 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g13571 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g14386 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g15499 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g17111 No alias pectin methylesterase & original description: none 0.07 OrthoFinder output from all 47 species
Ehy_g31652 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01015290001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.04 OrthoFinder output from all 47 species
GSVIVT01015852001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.04 OrthoFinder output from all 47 species
GSVIVT01031250001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.02 OrthoFinder output from all 47 species
LOC_Os01g53990.1 LOC_Os01g53990 pectin methylesterase 0.04 OrthoFinder output from all 47 species
LOC_Os05g44600.1 LOC_Os05g44600 pectin methylesterase 0.03 OrthoFinder output from all 47 species
Len_g02282 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Len_g46556 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
MA_14449g0010 No alias pectin methylesterase 0.03 OrthoFinder output from all 47 species
MA_16389g0020 No alias pectin methylesterase 0.02 OrthoFinder output from all 47 species
MA_40503g0010 ATPE11, PE11 pectin methylesterase 0.03 OrthoFinder output from all 47 species
Mp3g01170.1 No alias pectin methylesterase 0.03 OrthoFinder output from all 47 species
Mp5g03920.1 No alias pectin methylesterase 0.04 OrthoFinder output from all 47 species
Mp5g03930.1 No alias pectin methylesterase 0.04 OrthoFinder output from all 47 species
Nbi_g25019 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g27443 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g05557 No alias pectin methylesterase & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g06428 No alias pectin methylesterase & original description: none 0.1 OrthoFinder output from all 47 species
Ore_g26065 No alias pectin methylesterase & original description: none 0.1 OrthoFinder output from all 47 species
Ore_g26500 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g27386 No alias pectin methylesterase & original description: none 0.09 OrthoFinder output from all 47 species
Ore_g29702 No alias pectin methylesterase & original description: none 0.11 OrthoFinder output from all 47 species
Ore_g30829 No alias pectin methylesterase & original description: none 0.08 OrthoFinder output from all 47 species
Ore_g31394 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g08747 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g01944 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g18465 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g29894 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g63851 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000266 No alias pectin methylesterase & original description: CDS=1-1272 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0029.g010091 No alias pectin methylesterase & original description: CDS=1-882 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0104.g020122 No alias not classified & original description: CDS=269-877 0.03 OrthoFinder output from all 47 species
Sam_g12543 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Smo81583 No alias Cell wall.pectin.homogalacturonan.modification and... 0.03 OrthoFinder output from all 47 species
Solyc02g075620.4.1 Solyc02g075620 pectin methylesterase 0.03 OrthoFinder output from all 47 species
Solyc05g053680.1.1 Solyc05g053680 pectin methylesterase 0.03 OrthoFinder output from all 47 species
Spa_g07165 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g10100 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g29457 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g49902 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g54581 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g01655 No alias pecTin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g14064 No alias pecTin methylesterase & original description: none 0.07 OrthoFinder output from all 47 species
Tin_g20074 No alias pecTin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0030599 pectinesterase activity IEA Interproscan
BP GO:0042545 cell wall modification IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004568 chitinase activity IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006022 aminoglycan metabolic process IEP HCCA
BP GO:0006026 aminoglycan catabolic process IEP HCCA
BP GO:0006030 chitin metabolic process IEP HCCA
BP GO:0006032 chitin catabolic process IEP HCCA
BP GO:0006040 amino sugar metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016759 cellulose synthase activity IEP HCCA
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
BP GO:0016998 cell wall macromolecule catabolic process IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0044036 cell wall macromolecule metabolic process IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0046348 amino sugar catabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:1901071 glucosamine-containing compound metabolic process IEP HCCA
BP GO:1901072 glucosamine-containing compound catabolic process IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
BP GO:1901136 carbohydrate derivative catabolic process IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR000070 Pectinesterase_cat 89 369
No external refs found!