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  5. Dac_g18037

Dac_g18037


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dac_g18037

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00033p00240190 evm_27.TU.AmTr_v1... Cell cycle.organelle machineries.DNA... 0.02 OrthoFinder output from all 47 species
AMTR_s00439p00011030 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At5g04780,... 0.03 OrthoFinder output from all 47 species
Ala_g17608 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g03222 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g19305 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g20391 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g17095 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g27295 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0005.g009250 DOT4 not classified & original description: CDS=1-1692 0.07 OrthoFinder output from all 47 species
Azfi_s0048.g030454 No alias not classified & original description: CDS=2-2074 0.05 OrthoFinder output from all 47 species
Azfi_s0104.g044768 EMB2758 not classified & original description: CDS=1-1815 0.04 OrthoFinder output from all 47 species
Azfi_s0254.g060431 No alias not classified & original description: CDS=1-2856 0.06 OrthoFinder output from all 47 species
Azfi_s1396.g102567 No alias not classified & original description: CDS=1-1371 0.04 OrthoFinder output from all 47 species
Dde_g04238 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g22297 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g38238 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g46792 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g49830 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g51445 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_01592 No alias Pentatricopeptide repeat-containing protein At4g14050,... 0.04 OrthoFinder output from all 47 species
Len_g12162 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18265 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g34604 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g26082 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g44934 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g07356 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g07606 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g18809 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0140.g022672 No alias not classified & original description: CDS=1-3558 0.03 OrthoFinder output from all 47 species
Sam_g10477 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g36238 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g37186 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g50428 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 517 542
IPR002885 Pentatricopeptide_repeat 414 435
IPR002885 Pentatricopeptide_repeat 210 231
IPR002885 Pentatricopeptide_repeat 721 743
IPR002885 Pentatricopeptide_repeat 237 282
IPR002885 Pentatricopeptide_repeat 543 589
IPR002885 Pentatricopeptide_repeat 441 488
IPR002885 Pentatricopeptide_repeat 644 692
IPR002885 Pentatricopeptide_repeat 337 386
No external refs found!