Dac_g18379


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dac_g18379

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00243230 evm_27.TU.AmTr_v1... Putative pentatricopeptide repeat-containing protein... 0.04 OrthoFinder output from all 47 species
AMTR_s00016p00259690 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At5g46460,... 0.03 OrthoFinder output from all 47 species
AT3G62890 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.04 OrthoFinder output from all 47 species
Azfi_s0028.g023828 No alias not classified & original description: CDS=1-1797 0.04 OrthoFinder output from all 47 species
Azfi_s0078.g038295 No alias not classified & original description: CDS=1-2334 0.04 OrthoFinder output from all 47 species
Dcu_g17095 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Gb_17916 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.03 OrthoFinder output from all 47 species
LOC_Os01g42280.1 CRR21, LOC_Os01g42280 RNA editing factor (CRR21) 0.03 OrthoFinder output from all 47 species
Len_g01813 REME1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g18979 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g33493 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g43881 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g04178 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g05976 OTP82 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g10361 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g17746 EMB2758 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g28215 EMB2758 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g35720 REME1 not classified & original description: none 0.08 OrthoFinder output from all 47 species
Msp_g41114 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g42789 DOT4 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Nbi_g06311 OTP86 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g12706 REME1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g39734 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g53186 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g56659 No alias ssDNA-binding protein *(OSB) & original description: none 0.06 OrthoFinder output from all 47 species
Sam_g03099 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g26050 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g56258 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g06631 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e003605_P001 DOT4, Zm00001e003605 Pentatricopeptide repeat-containing protein DOT4,... 0.03 OrthoFinder output from all 47 species
Zm00001e007042_P001 Zm00001e007042 RNA editing factor (AEF1) 0.02 OrthoFinder output from all 47 species
Zm00001e011467_P004 emb1899, EMB175,... Pentatricopeptide repeat-containing protein At5g03800... 0.03 OrthoFinder output from all 47 species
Zm00001e029186_P001 Zm00001e029186 Pentatricopeptide repeat-containing protein At1g19720... 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 123 170
IPR002885 Pentatricopeptide_repeat 225 272
IPR002885 Pentatricopeptide_repeat 21 68
No external refs found!