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  5. Dac_g18570

Dac_g18570


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dac_g18570

Target Alias Description ECC score Gene Family Method Actions
AT5G44230 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g039747 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g13651 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g17260 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g24227 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g23786 MEF19 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g70432 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene03152.t1 Aspi01Gene03152 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0010.g012382 OTP84 not classified & original description: CDS=1-2100 0.03 OrthoFinder output from all 47 species
Azfi_s0049.g030882 CRR22 not classified & original description: CDS=1-1611 0.04 OrthoFinder output from all 47 species
Cba_g07301 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g15165 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g67737 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.30G001600.1 Ceric.30G001600 not classified & original description: pacid=50608965... 0.05 OrthoFinder output from all 47 species
Ceric.30G037100.1 Ceric.30G037100 not classified & original description: pacid=50608918... 0.03 OrthoFinder output from all 47 species
Dcu_g05745 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g08966 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g21484 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g22018 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g28695 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g51270 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01028819001 No alias Pentatricopeptide repeat-containing protein At5g52850,... 0.03 OrthoFinder output from all 47 species
GSVIVT01033304001 CRR28 Pentatricopeptide repeat-containing protein At2g02980,... 0.03 OrthoFinder output from all 47 species
GSVIVT01035491001 No alias Pentatricopeptide repeat-containing protein At4g33170... 0.04 OrthoFinder output from all 47 species
LOC_Os08g06490.2 SLO1, LOC_Os08g06490 Pentatricopeptide repeat-containing protein At4g22760... 0.04 OrthoFinder output from all 47 species
Len_g50268 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g33292 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_137736g0010 REME1 Pentatricopeptide repeat-containing protein At4g02750... 0.03 OrthoFinder output from all 47 species
Nbi_g14034 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g07049 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g16384 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g16784 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g31318 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pp3c17_4940V3.1 Pp3c17_4940 organellar single-stranded DNA binding protein 3 0.01 OrthoFinder output from all 47 species
Ppi_g07605 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0020.g008203 OTP86 not classified & original description: CDS=1-2439 0.04 OrthoFinder output from all 47 species
Solyc01g081020.1.1 Solyc01g081020 RNA editing factor (OTP80) 0.04 OrthoFinder output from all 47 species
Spa_g05402 CRR2 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g51341 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g53279 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g44238 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e003605_P001 DOT4, Zm00001e003605 Pentatricopeptide repeat-containing protein DOT4,... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEP HCCA
MF GO:0031072 heat shock protein binding IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 359 382
IPR002885 Pentatricopeptide_repeat 461 483
IPR002885 Pentatricopeptide_repeat 283 329
IPR002885 Pentatricopeptide_repeat 79 126
IPR002885 Pentatricopeptide_repeat 181 228
IPR002885 Pentatricopeptide_repeat 385 432
No external refs found!