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  5. Dac_g19073

Dac_g19073 (ATHB1, ATHB-1, HAT5,...)


Aliases : ATHB1, ATHB-1, HAT5, HD-ZIP-1, HB-1

Description : HD-ZIP I/II-type transcription factor & original description: none


Gene families : OG0000129 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000129_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dac_g19073

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00008p00214750 HB6, ATHB6,... RNA biosynthesis.transcriptional activation.HB... 0.03 OrthoFinder output from all 47 species
Ala_g19440 ATHB3, HB-3, ATHB-3, HAT7 HD-ZIP I/II-type transcription factor & original... 0.06 OrthoFinder output from all 47 species
Ala_g31747 ATHB1, ATHB-1,... HD-ZIP I/II-type transcription factor & original... 0.04 OrthoFinder output from all 47 species
Cba_g29320 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g39061 ATHB5, ATHB-5, HB5 HD-ZIP I/II-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Cba_g68678 ATHB16, HB16, ATHB-16 regulatory protein *(LMI1) of floral meristem identity... 0.03 OrthoFinder output from all 47 species
Cba_g72751 ATHB3, HB-3, ATHB-3, HAT7 HD-ZIP I/II-type transcription factor & original... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000789.4 HAT14 RNA biosynthesis.transcriptional activation.HB... 0.01 OrthoFinder output from all 47 species
Len_g16712 ATHB5, ATHB-5, HB5 HD-ZIP I/II-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Sam_g35778 No alias HD-ZIP I/II-type transcription factor & original... 0.02 OrthoFinder output from all 47 species
Zm00001e009770_P001 ATHB1, ATHB-1,... transcription factor (HD-ZIP I/II) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
InterPro domains Description Start Stop
IPR001356 Homeobox_dom 124 178
No external refs found!