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  5. Dac_g21016

Dac_g21016


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dac_g21016

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00032p00177680 evm_27.TU.AmTr_v1... Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
AMTR_s00039p00023570 EMB2758 Pentatricopeptide repeat-containing protein At4g33990... 0.02 OrthoFinder output from all 47 species
AMTR_s00122p00115170 CRR21 RNA processing.organelle machineries.RNA... 0.02 OrthoFinder output from all 47 species
AMTR_s00155p00018120 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At4g21300... 0.02 OrthoFinder output from all 47 species
AT3G08820 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.07 OrthoFinder output from all 47 species
AT3G23330 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT4G16470 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.04 OrthoFinder output from all 47 species
Adi_g002797 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g114947 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g18205 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g06767 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06880 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g26694 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g27516 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30821 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g40210 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g56508 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g59203 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g27280 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g27283 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g28638 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.10G012900.1 CRR22, Ceric.10G012900 not classified & original description: pacid=50612392... 0.04 OrthoFinder output from all 47 species
Len_g03784 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g18044 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18554 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g22137 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g23812 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Len_g33406 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g27549 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g26038 EMB2261 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g13329 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57535 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63629 LPA66 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g03884 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g03099 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g04976 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g27632 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g38610 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g38690 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g51760 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g23011 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g44089 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0016409 palmitoyltransferase activity IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 206 253
IPR002885 Pentatricopeptide_repeat 105 152
IPR002885 Pentatricopeptide_repeat 308 355
IPR002885 Pentatricopeptide_repeat 408 455
IPR002885 Pentatricopeptide_repeat 514 541
IPR002885 Pentatricopeptide_repeat 484 506
IPR002885 Pentatricopeptide_repeat 8 36
IPR002885 Pentatricopeptide_repeat 181 205
IPR002885 Pentatricopeptide_repeat 282 305
No external refs found!