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  5. Dac_g21301

Dac_g21301 (PGP2)


Aliases : PGP2

Description : subfamily ABCB transporter & original description: none


Gene families : OG0000048 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dac_g21301

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00254310 ABCB19,... Solute transport.primary active transport.ABC... 0.01 OrthoFinder output from all 47 species
Adi_g112185 ABCB19,... not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g24244 ABCB19,... subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Als_g05763 ABCB19,... subfamily ABCB transporter & original description: none 0.01 OrthoFinder output from all 47 species
Als_g14091 ATPGP4, PGP4, ABCB4, MDR4 subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Als_g14092 PGP21 subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g16050 PGP2 subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g09164 PGP11 subfamily ABCB transporter & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g32929 ABCB19,... subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene13015.t1 ABCB19,... subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene20710.t1 ABCB19,... subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene46795.t1 PGP2, Aspi01Gene46795 subfamily ABCB transporter & original description: none 0.01 OrthoFinder output from all 47 species
Azfi_s0002.g001271 ABCB19,... subfamily ABCB transporter & original description: CDS=82-3879 0.02 OrthoFinder output from all 47 species
Azfi_s0114.g046165 PGP2 subfamily ABCB transporter & original description: CDS=242-4291 0.01 OrthoFinder output from all 47 species
Azfi_s0208.g057960 PGP2 not classified & original description: CDS=388-3987 0.02 OrthoFinder output from all 47 species
Cba_g24784 ABCB19,... subfamily ABCB transporter & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.06G076400.1 ABCB19,... subfamily ABCB transporter & original description:... 0.01 OrthoFinder output from all 47 species
Dcu_g20229 PGP11 subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g13758 ABCB19,... subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01033645001 PGP1, ABCB1, ATPGP1 Solute transport.primary active transport.ABC... 0.02 OrthoFinder output from all 47 species
LOC_Os04g38570.1 ABCB19,... auxin efflux transporter (ABCB19) 0.01 OrthoFinder output from all 47 species
LOC_Os04g54930.1 ABCB19,... subfamily ABCB transporter 0.05 OrthoFinder output from all 47 species
Len_g23455 PGP11 subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g10739 ABCB19,... subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g16090 ABCB19,... subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
MA_18863g0020 PGP3, MDR3 ABC transporter B family member 3 OS=Arabidopsis... 0.01 OrthoFinder output from all 47 species
Mp2g02910.1 ABCB19,... auxin efflux transporter (ABCB19). subfamily ABCB transporter 0.02 OrthoFinder output from all 47 species
Mp2g11920.1 ABCB19,... subfamily ABCB transporter 0.01 OrthoFinder output from all 47 species
Msp_g35589 ABCB19,... subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g03862 ABCB19,... subfamily ABCB transporter & original description: none 0.01 OrthoFinder output from all 47 species
Pnu_g08145 PGP11 subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g60298 PGP2 subfamily ABCB transporter & original description: none 0.01 OrthoFinder output from all 47 species
Spa_g08601 PGP11 subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e014797_P002 Zm00001e014797 subfamily ABCB transporter 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
MF GO:0140359 ABC-type transporter activity IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like_ATP-bd 397 546
IPR003439 ABC_transporter-like_ATP-bd 1054 1202
IPR011527 ABC1_TM_dom 719 988
IPR011527 ABC1_TM_dom 55 326
No external refs found!