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  5. Dac_g21661

Dac_g21661 (UPL6)


Aliases : UPL6

Description : E3 ubiquitin ligase *(UPL6) & original description: none


Gene families : OG0001555 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001555_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dac_g21661

Target Alias Description ECC score Gene Family Method Actions
Als_g07504 UPL7 E3 ubiquitin ligase *(UPL6) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g62754 UPL6 E3 ubiquitin ligase *(UPL6) & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g01843 UPL7 E3 ubiquitin ligase *(UPL6) & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g10603 UPL6 E3 ubiquitin ligase *(UPL6) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g38315 UPL6 E3 ubiquitin ligase *(UPL6) & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.1Z062300.1 UPL7, Ceric.1Z062300 E3 ubiquitin ligase *(UPL6) & original description:... 0.03 OrthoFinder output from all 47 species
Gb_04194 UPL6 monomeric E3 ubiquitin ligase (HECT) 0.04 OrthoFinder output from all 47 species
LOC_Os03g47949.1 UPL7, LOC_Os03g47949 monomeric E3 ubiquitin ligase (HECT) 0.02 OrthoFinder output from all 47 species
LOC_Os05g06690.1 UPL6, LOC_Os05g06690 monomeric E3 ubiquitin ligase (HECT) 0.04 OrthoFinder output from all 47 species
Ore_g08375 UPL6 E3 ubiquitin ligase *(UPL6) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g19966 UPL7 E3 ubiquitin ligase *(UPL6) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g01368 UPL7 E3 ubiquitin ligase *(UPL6) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g39628 No alias E3 ubiquitin ligase *(UPL6) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e031128_P003 UPL6, Zm00001e031128 monomeric E3 ubiquitin ligase (HECT) 0.03 OrthoFinder output from all 47 species
Zm00001e039899_P001 UPL6, Zm00001e039899 monomeric E3 ubiquitin ligase (HECT) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000105 histidine biosynthetic process IEP HCCA
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0003950 NAD+ ADP-ribosyltransferase activity IEP HCCA
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004185 serine-type carboxypeptidase activity IEP HCCA
BP GO:0006547 histidine metabolic process IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
MF GO:0016763 pentosyltransferase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA
InterPro domains Description Start Stop
IPR000569 HECT_dom 738 1044
No external refs found!