Dac_g27210


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dac_g27210

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00032470 No alias Pentatricopeptide repeat-containing protein At1g25360... 0.02 OrthoFinder output from all 47 species
Adi_g004496 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g020425 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g036657 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g036795 MEF19 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g07103 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g31177 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g32451 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g34486 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g35868 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g36220 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g36435 CRR22 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06136 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07490 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g28460 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g54371 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g32957 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g04156 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene08612.t1 Aspi01Gene08612 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0144.g051639 No alias not classified & original description: CDS=1-2751 0.03 OrthoFinder output from all 47 species
Azfi_s0191.g056992 No alias not classified & original description: CDS=1-2262 0.03 OrthoFinder output from all 47 species
Cba_g02717 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g06233 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g06580 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g06585 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20251 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20824 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g25491 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g29385 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g34644 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.02G058500.1 Ceric.02G058500 not classified & original description: pacid=50584148... 0.03 OrthoFinder output from all 47 species
Ceric.08G020400.1 OTP84, Ceric.08G020400 not classified & original description: pacid=50638334... 0.03 OrthoFinder output from all 47 species
Ceric.14G004700.1 Ceric.14G004700 not classified & original description: pacid=50634585... 0.03 OrthoFinder output from all 47 species
Ceric.29G017400.1 Ceric.29G017400 not classified & original description: pacid=50625928... 0.03 OrthoFinder output from all 47 species
Dac_g29961 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g08994 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g32689 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g08457 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g13082 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g19684 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g22351 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g23754 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g24679 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g54673 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g28033 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g32914 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g36056 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g28796 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g34524 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g21816 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g03012 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g03294 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g11801 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g18013 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57697 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g03485 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g03495 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g04532 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g19871 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g23560 REME1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g30095 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g33734 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g03881 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g04603 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g06828 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g07606 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g12193 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g13926 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53359 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g56364 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g62122 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000452 No alias not classified & original description: CDS=1-2067 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0013.g005914 No alias not classified & original description: CDS=1-2298 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0124.g021596 No alias not classified & original description: CDS=1-2502 0.03 OrthoFinder output from all 47 species
Spa_g22905 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g24319 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g49369 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g17781 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 94 141
IPR002885 Pentatricopeptide_repeat 396 443
IPR002885 Pentatricopeptide_repeat 1 39
IPR002885 Pentatricopeptide_repeat 298 328
IPR002885 Pentatricopeptide_repeat 197 226
IPR002885 Pentatricopeptide_repeat 372 395
No external refs found!