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  5. Dac_g28531

Dac_g28531


Description : component *(eS19) of small ribosomal-subunit (SSU) proteome & original description: none


Gene families : OG0000873 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000873_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dac_g28531

Target Alias Description ECC score Gene Family Method Actions
AT3G02080 No alias Ribosomal protein S19e family protein 0.03 OrthoFinder output from all 47 species
AT5G61170 No alias Ribosomal protein S19e family protein 0.04 OrthoFinder output from all 47 species
Adi_g052443 No alias component *(eS19) of small ribosomal-subunit (SSU)... 0.04 OrthoFinder output from all 47 species
Als_g06716 No alias component *(eS19) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Aop_g00927 No alias component *(eS19) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Azfi_s0007.g011210 No alias component *(eS19) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021017.6 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.01 OrthoFinder output from all 47 species
Cre02.g106600 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.04 OrthoFinder output from all 47 species
Dac_g22936 No alias component *(eS19) of small ribosomal-subunit (SSU)... 0.05 OrthoFinder output from all 47 species
Dcu_g21083 No alias component *(eS19) of small ribosomal-subunit (SSU)... 0.04 OrthoFinder output from all 47 species
Ehy_g00300 No alias component *(eS19) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
GSVIVT01012199001 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.05 OrthoFinder output from all 47 species
LOC_Os03g31090.1 LOC_Os03g31090 component RPS19 of SSU proteome 0.04 OrthoFinder output from all 47 species
MA_10427917g0010 No alias component RPS19 of SSU proteome 0.02 OrthoFinder output from all 47 species
Mp1g27380.1 No alias component RPS19 of SSU proteome 0.05 OrthoFinder output from all 47 species
Msp_g43925 No alias component *(eS19) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Ore_g34855 No alias component *(eS19) of small ribosomal-subunit (SSU)... 0.05 OrthoFinder output from all 47 species
Pir_g00273 No alias component *(eS19) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
Pp3c14_19640V3.1 Pp3c14_19640 Ribosomal protein S19e family protein 0.02 OrthoFinder output from all 47 species
Pp3c17_15200V3.1 Pp3c17_15200 Ribosomal protein S19e family protein 0.02 OrthoFinder output from all 47 species
Pp3c1_28780V3.1 Pp3c1_28780 Ribosomal protein S19e family protein 0.05 OrthoFinder output from all 47 species
Pp3c2_10060V3.1 Pp3c2_10060 Ribosomal protein S19e family protein 0.01 OrthoFinder output from all 47 species
Ppi_g41385 No alias component *(eS19) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
Sam_g22603 No alias component *(eS19) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Sam_g27047 No alias component *(eS19) of small ribosomal-subunit (SSU)... 0.04 OrthoFinder output from all 47 species
Sam_g31814 No alias component *(eS19) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Smo153225 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.02 OrthoFinder output from all 47 species
Solyc03g115360.3.1 Solyc03g115360 component RPS19 of SSU proteome 0.06 OrthoFinder output from all 47 species
Solyc12g039120.2.1 Solyc12g039120 component RPS19 of SSU proteome 0.05 OrthoFinder output from all 47 species
Spa_g11663 No alias component *(eS19) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Spa_g41565 No alias component *(eS19) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Zm00001e002011_P001 Zm00001e002011 component RPS19 of SSU proteome 0.04 OrthoFinder output from all 47 species
Zm00001e038053_P003 Zm00001e038053 component RPS19 of SSU proteome 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0003779 actin binding IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
MF GO:0030674 protein-macromolecule adaptor activity IEP HCCA
MF GO:0044877 protein-containing complex binding IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0051015 actin filament binding IEP HCCA
MF GO:0060090 molecular adaptor activity IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
InterPro domains Description Start Stop
IPR001266 Ribosomal_S19e 17 167
No external refs found!