Dac_g31924 (ARF1)

Aliases : ARF1

Description : ARF-type transcription factor & original description: none

Gene families : OG0000088 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000088_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Dac_g31924

Target	Alias	Description	ECC score	Gene Family Method
AT1G35540	ARF14	auxin response factor 14	0.04	OrthoFinder output from all 47 species
AT4G23980	ARF9	auxin response factor 9	0.02	OrthoFinder output from all 47 species
GSVIVT01021553001	ARF6	RNA biosynthesis.transcriptional activation.B3...	0.04	OrthoFinder output from all 47 species
Lfl_g12182	ARF6	ARF-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Lfl_g35515	ARF6	ARF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
MA_40335g0010	HSS, ARF1-BP, ARF2, ORE14	transcription factor (ARF)	0.03	OrthoFinder output from all 47 species
Msp_g31549	ARF16	ARF-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Sacu_v1.1_s0204.g025692	ARF10	ARF-type transcription factor & original description:...	0.02	OrthoFinder output from all 47 species
Zm00001e041248_P001	ARF10, Zm00001e041248	transcription factor (ARF)	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0008194	UDP-glycosyltransferase activity	IEP	HCCA
MF	GO:0015018	galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity	IEP	HCCA
MF	GO:0015020	glucuronosyltransferase activity	IEP	HCCA
MF	GO:0016758	hexosyltransferase activity	IEP	HCCA
MF	GO:0035673	oligopeptide transmembrane transporter activity	IEP	HCCA
MF	GO:0042887	amide transmembrane transporter activity	IEP	HCCA
MF	GO:1904680	peptide transmembrane transporter activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR033389	AUX/IAA_dom	684	771
IPR010525	ARF_dom	289	370
IPR003340	B3_DNA-bd	164	265

External Links

No external refs found!