Dac_g32334 (CIP111)

Aliases : CIP111

Description : platform ATPase CDC48 & original description: none

Gene families : OG0000324 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000324_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Dac_g32334

Target	Alias	Description	ECC score	Gene Family Method
AT3G01610	emb1354, CDC48C	cell division cycle 48C	0.03	OrthoFinder output from all 47 species
Ala_g14618	No alias	platform ATPase CDC48 & original description: none	0.03	OrthoFinder output from all 47 species
Als_g14974	No alias	platform ATPase CDC48 & original description: none	0.03	OrthoFinder output from all 47 species
Lfl_g33871	CIP111	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Nbi_g44449	emb1354, CDC48C	platform ATPase CDC48 & original description: none	0.05	OrthoFinder output from all 47 species
Pp3c12_11370V3.1	Pp3c12_11370	AAA-type ATPase family protein	0.02	OrthoFinder output from all 47 species
Smo89456	emb1354, CDC48C	Cell division control protein 48 homolog C...	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATP hydrolysis activity	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003712	transcription coregulator activity	IEP	HCCA
BP	GO:0006357	regulation of transcription by RNA polymerase II	IEP	HCCA
CC	GO:0016592	mediator complex	IEP	HCCA
CC	GO:0140513	nuclear protein-containing complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003959	ATPase_AAA_core	761	892
IPR003959	ATPase_AAA_core	449	579
IPR041569	AAA_lid_3	915	960
IPR041569	AAA_lid_3	605	645

External Links

No external refs found!