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  5. Aev_g02126

Aev_g02126 (OSB1)


Aliases : OSB1

Description : ssDNA-binding protein *(OSB) & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aev_g02126

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00004p00076010 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At4g13650... 0.02 OrthoFinder output from all 47 species
AT3G49740 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.01 OrthoFinder output from all 47 species
Ala_g05216 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g24707 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g03858 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g09044 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g15766 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g22148 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g27600 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g28207 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0188.g056770 OTP84 not classified & original description: CDS=1-2469 0.05 OrthoFinder output from all 47 species
Cba_g04666 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g06485 EMB2261 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g14919 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g20439 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g33015 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g09346 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g15344 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g18152 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g18763 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g30287 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g33321 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g35240 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g36017 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g43234 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g03432 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g04877 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g05938 OTP86 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g21846 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g22123 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g26477 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g29466 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g38127 MEF19 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g46783 REME1 not classified & original description: none 0.06 OrthoFinder output from all 47 species
GSVIVT01036975001 EMB2758 Pentatricopeptide repeat-containing protein At4g33990... 0.06 OrthoFinder output from all 47 species
LOC_Os02g18810.1 LOC_Os02g18810 Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
LOC_Os04g35610.1 LOC_Os04g35610 RNA editing factor (SLO2) 0.04 OrthoFinder output from all 47 species
LOC_Os06g08650.1 LOC_Os06g08650 Pentatricopeptide repeat-containing protein At2g03380,... 0.04 OrthoFinder output from all 47 species
LOC_Os08g05750.1 LOC_Os08g05750 Pentatricopeptide repeat-containing protein At4g16835,... 0.03 OrthoFinder output from all 47 species
Len_g25958 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g44704 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06683 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g07019 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g41072 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10433543g0010 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.04 OrthoFinder output from all 47 species
MA_106123g0010 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.02 OrthoFinder output from all 47 species
MA_119519g0010 No alias Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
MA_122546g0010 No alias Putative pentatricopeptide repeat-containing protein... 0.01 OrthoFinder output from all 47 species
MA_136326g0010 No alias Pentatricopeptide repeat-containing protein At3g57430,... 0.02 OrthoFinder output from all 47 species
MA_14938g0010 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.02 OrthoFinder output from all 47 species
MA_1673g0010 No alias Pentatricopeptide repeat-containing protein At1g19720... 0.02 OrthoFinder output from all 47 species
MA_183278g0010 CRR22 Pentatricopeptide repeat-containing protein At3g12770... 0.03 OrthoFinder output from all 47 species
MA_22485g0010 CRR2 Pentatricopeptide repeat-containing protein At3g46790,... 0.01 OrthoFinder output from all 47 species
MA_2473g0010 CRR22 Pentatricopeptide repeat-containing protein At3g12770... 0.02 OrthoFinder output from all 47 species
MA_286190g0010 OTP86 Pentatricopeptide repeat-containing protein At3g63370,... 0.02 OrthoFinder output from all 47 species
MA_356g0010 No alias Putative pentatricopeptide repeat-containing protein... 0.01 OrthoFinder output from all 47 species
MA_75255g0010 No alias Pentatricopeptide repeat-containing protein At4g33170... 0.02 OrthoFinder output from all 47 species
MA_7691g0010 CRR22 Pentatricopeptide repeat-containing protein At2g22070... 0.02 OrthoFinder output from all 47 species
MA_81436g0010 OTP84 Pentatricopeptide repeat-containing protein At4g21300... 0.02 OrthoFinder output from all 47 species
MA_86894g0010 CRR22 Pentatricopeptide repeat-containing protein At3g12770... 0.02 OrthoFinder output from all 47 species
Msp_g11907 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g14918 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g10323 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g15416 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g17079 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g24619 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Nbi_g28137 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g03334 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g12874 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g15855 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g57665 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g64858 REME1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g04466 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g22375 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g30309 CRR2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g11000 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g17170 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g22128 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g31303 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g31446 CRR22 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ppi_g53699 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g56997 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0004.g002140 No alias ssDNA-binding protein *(OSB) & original description: CDS=75-2237 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0008.g004186 No alias not classified & original description: CDS=1-2421 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0075.g017370 No alias not classified & original description: CDS=72-2741 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0172.g024419 No alias not classified & original description: CDS=1-2448 0.03 OrthoFinder output from all 47 species
Sam_g11266 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g23549 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003697 single-stranded DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR000424 Primosome_PriB/ssb 131 228
No external refs found!